RNA id: TU179075



Basic Information


Item Value
RNA id TU179075
length 241
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G142357
representative True

Chromosome Information


Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 20375386 ~ 20375626 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GAAACACATCGTGTCCTTCCGAAGGCAGCTGTATATGATCCTCAATAACATCAATGAGGAtcttaatgtaatttttaaatttaagatcGACAATACCGACTACGTCGTGTTCGCTACTTCGGAGTCCATGAAGTGTTTCAGGTGTGGGAGTGAGTGGCATTTCGTGAGGAATTGTCCCAAGCAGGACAGGGAGCGGGAGGAGGAGCGGGGCGACGCGGGGAGGAATAGAGACACCGGCCCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU179066 lncRNA downstream 194363 20180795 ~ 20181023 (-) True G142348
TU178890 lncRNA downstream 776272 19597329 ~ 19599114 (-) True G142200
TU178861 lncRNA downstream 826454 19548641 ~ 19548932 (-) True G142176
TU178747 lncRNA downstream 1537901 18835540 ~ 18837485 (-) True G142090
TU178720 lncRNA downstream 2068703 18306362 ~ 18306683 (-) True G142066
TU179126 lncRNA upstream 279437 20655063 ~ 20669631 (-) True G142404
TU179128 lncRNA upstream 283986 20659612 ~ 20743604 (-) True G142406
TU179139 lncRNA upstream 382493 20758119 ~ 20758457 (-) True G142417
TU179140 lncRNA upstream 388918 20764544 ~ 20766330 (-) True G142418
TU179147 lncRNA upstream 391728 20767354 ~ 20767630 (-) True G142420
AMCG00003345 mRNA downstream 12800 20223823 ~ 20362586 (-) True AMCG00003345
AMCG00003344 mRNA downstream 209803 20159328 ~ 20165583 (-) True AMCG00003344
AMCG00003341 mRNA downstream 341797 20019858 ~ 20033589 (-) True AMCG00003341
AMCG00003342 mRNA downstream 370073 19995019 ~ 20005313 (-) True AMCG00003342
AMCG00003339 mRNA downstream 446115 19910276 ~ 19929271 (-) True AMCG00003339
AMCG00003347 mRNA upstream 226126 20601752 ~ 20604005 (-) True AMCG00003347
AMCG00003346 mRNA upstream 247777 20623403 ~ 20629596 (-) True AMCG00003346
AMCG00003350 mRNA upstream 400953 20776579 ~ 20796389 (-) True AMCG00003350
AMCG00003353 mRNA upstream 515125 20890751 ~ 20892570 (-) True AMCG00003353
AMCG00003354 mRNA upstream 532054 20907680 ~ 20912693 (-) True AMCG00003354
TU179004 other downstream 498624 19814142 ~ 19876762 (-) False AMCG00003337
TU178878 other downstream 805771 19566913 ~ 19569615 (-) False AMCG00003320
TU178867 other downstream 808799 19565395 ~ 19566587 (-) False AMCG00003320
TU178865 other downstream 812108 19555443 ~ 19563278 (-) False AMCG00003320
TU178862 other downstream 821274 19552871 ~ 19554112 (-) False AMCG00003320

Expression Profile