RNA id: TU179128



Basic Information


Item Value
RNA id TU179128
length 264
lncRNA type inter_gene
GC content 0.46
exon number 3
gene id G142406
representative True

Chromosome Information


Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 20659612 ~ 20743604 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GCCCGCGGGAGGGGCCGATAGAAAATGGCGAGTCTGTGTAAAAGGCAGCAATGTACCATCGAGAGACGCGGCTTTCGGCAGGAACTTGACTCGTGGCGGCATAAACTCATTCACTGTGGTTTGAAAGCATTTTGGAAGGACTGTTCGGACCAGGACTTGTAAAAGATCTCACCCTATTTAAAGATTGTGAACCAGAAGGTGTATCAGATTGGTCATTTGATGAAAATTGTCTCTTCTGCTGCTTAAGACGAGAAAAAGTAAAGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU179075 lncRNA downstream 283986 20375386 ~ 20375626 (-) True G142357
TU179066 lncRNA downstream 478589 20180795 ~ 20181023 (-) True G142348
TU178890 lncRNA downstream 1060498 19597329 ~ 19599114 (-) True G142200
TU178861 lncRNA downstream 1110680 19548641 ~ 19548932 (-) True G142176
TU178747 lncRNA downstream 1822127 18835540 ~ 18837485 (-) True G142090
TU179139 lncRNA upstream 14515 20758119 ~ 20758457 (-) True G142417
TU179140 lncRNA upstream 20940 20764544 ~ 20766330 (-) True G142418
TU179147 lncRNA upstream 23750 20767354 ~ 20767630 (-) True G142420
TU179148 lncRNA upstream 27119 20770723 ~ 20771795 (-) True G142421
TU179161 lncRNA upstream 66354 20809958 ~ 20810651 (-) True G142433
AMCG00003346 mRNA downstream 30016 20623403 ~ 20629596 (-) True AMCG00003346
AMCG00003347 mRNA downstream 55607 20601752 ~ 20604005 (-) True AMCG00003347
AMCG00003345 mRNA downstream 297026 20223823 ~ 20362586 (-) True AMCG00003345
AMCG00003344 mRNA downstream 494029 20159328 ~ 20165583 (-) True AMCG00003344
AMCG00003341 mRNA downstream 626023 20019858 ~ 20033589 (-) True AMCG00003341
AMCG00003350 mRNA upstream 32975 20776579 ~ 20796389 (-) True AMCG00003350
AMCG00003353 mRNA upstream 147147 20890751 ~ 20892570 (-) True AMCG00003353
AMCG00003354 mRNA upstream 164076 20907680 ~ 20912693 (-) True AMCG00003354
AMCG00003352 mRNA upstream 199152 20942756 ~ 20945804 (-) True AMCG00003352
AMCG00003355 mRNA upstream 248881 20992485 ~ 20996275 (-) True AMCG00003355
TU179004 other downstream 782850 19814142 ~ 19876762 (-) False AMCG00003337
TU178878 other downstream 1089997 19566913 ~ 19569615 (-) False AMCG00003320
TU178867 other downstream 1093025 19565395 ~ 19566587 (-) False AMCG00003320
TU178865 other downstream 1096334 19555443 ~ 19563278 (-) False AMCG00003320
TU178862 other downstream 1105500 19552871 ~ 19554112 (-) False AMCG00003320

Expression Profile