RNA id: TU179463



Basic Information


Item Value
RNA id TU179463
length 223
lncRNA type inter_gene
GC content 0.45
exon number 2
gene id G142663
representative True

Chromosome Information


Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 22084918 ~ 22085191 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


aagctgcttggcgatggtcttgtagcccattccagccttgtgtaggtctacaatcttgtccctgacatccttggacagctctttggtcttggccattgtggagagtttggaatctgattgattgattgcttctgtggacaggtgtcttttatacaggtaacgagctgagattaggagcactgcctttaagagaaatcttgctgattgatagggcatcaaatac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU179460 lncRNA downstream 14936 22066953 ~ 22069982 (-) True G142661
TU179329 lncRNA downstream 322660 21762012 ~ 21762258 (-) True G142570
TU179305 lncRNA downstream 625685 21451675 ~ 21459233 (-) True G142549
TU179287 lncRNA downstream 836484 21247543 ~ 21248434 (-) True G142533
TU179280 lncRNA downstream 871527 21176344 ~ 21213391 (-) False G142531
TU179466 lncRNA upstream 6510 22091701 ~ 22094628 (-) True G142665
TU179515 lncRNA upstream 617391 22702582 ~ 22706511 (-) True G142709
TU179532 lncRNA upstream 742881 22828072 ~ 22828460 (-) True G142725
AMCG00003367 mRNA downstream 64904 21994244 ~ 22020014 (-) True AMCG00003367
AMCG00003365 mRNA downstream 94498 21968705 ~ 21990420 (-) True AMCG00003365
AMCG00003366 mRNA downstream 218333 21818186 ~ 21866585 (-) True AMCG00003366
AMCG00003369 mRNA downstream 270134 21801030 ~ 21814784 (-) True AMCG00003369
AMCG00003368 mRNA downstream 309470 21766960 ~ 21775448 (-) True AMCG00003368
AMCG00003373 mRNA upstream 18936 22104127 ~ 22108082 (-) True AMCG00003373
AMCG00003375 mRNA upstream 746998 22832189 ~ 22833510 (-) True AMCG00003375
AMCG00003377 mRNA upstream 895309 22980500 ~ 22985638 (-) True AMCG00003377
AMCG00003376 mRNA upstream 900481 22985672 ~ 22986067 (-) True AMCG00003376
TU179004 other downstream 2208156 19814142 ~ 19876762 (-) False AMCG00003337
TU178878 other downstream 2515303 19566913 ~ 19569615 (-) False AMCG00003320
TU178867 other downstream 2518331 19565395 ~ 19566587 (-) False AMCG00003320
TU178865 other downstream 2521640 19555443 ~ 19563278 (-) False AMCG00003320
TU178862 other downstream 2530806 19552871 ~ 19554112 (-) False AMCG00003320

Expression Profile