RNA id: AMCG00003653



Basic Information


Item Value
RNA id AMCG00003653
length 1002
RNA type mRNA
GC content 0.60
exon number 1
gene id AMCG00003653
representative True

Chromosome Information


Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 13091093 ~ 13092094 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAACGCCTCGGTGCTCTTCACCTCCTGCACTGCAGCCTCCTCAGCGGTCCCCCAGCCAACAGGGGTGCTGGTCTCCCTCAACCTCCCCTACACGGTGGCAGAGCTGATCATTGCTGTCCTCTCCACCGCAGGCAACGTGCTGGTCTGCGTCGCCgtggggaaaaacaggaggCTGCGCACGGTCACCAATTACTTCCTGGTGTCGCTGGCCGTCGCGGACATCTGTGTGGGAGCCCTGGCCATTCCCTGCGCCATCCTGACAGACACAGGCATCCCCCGGCACAACCTGTATCTGTGCCTGCTGATGCTCTCCGTGCTGATCATGCTGACACAGAGCTCCATCTTCAGCCTGCTGGCCGTGGCCGTGGAGCGCTACATCGCCATCTTCCTCCCCTACCACTACCACAGTGTCATGACCTCCCGCAACGCCATCCTCATCATCGTCCTCACCTGGATCCTGGCCTTCCTCATCGGGCTGGTGCCTCTGATGGGCTGGTACAAAACACCCCCGGAGTCTGGCTACTGCTTCTTCGTCTTCGTGGTGGACATGACGTACATGGTGTACTTCAACTTCTTCGGCTGCGTGCTCACTCCCCTGATCATCATGTTCCTCATCTACGCGCAGATCTTCATTACCGTGAAGCGGCAGATCCGGCGCATGGCGGCCGACAGGGTGACGGGCGAGCTGCGGGACAAGCAGGCTGCTAGTATGCGGAAGGAGATGAAGACCGCAACCTCGCTCTTCCTGGTCCTGTTCCTCTTCACCGTCTGCTGGATCCCCCTTCACATCATCAACTGCTTCATCCTGCTCTGCCCGCACTGCCCCGTCCCCCTGCCGCTGCTGCTCGCCGCCATCATCCTGTCTCACGCCAACTCCGCTGTCAACCCCATCCTCTATGCCTACAAGATGAAGGCCTTCCGCAGGACCTTCAAAGCCATCTTCCTGTGCTGTAGCAATACCGTAGAGCCAGAGGATGGCCCAGAGCACGCTGTCCACTGA

Function


GO: NA

KEGG:

id description
K04266 ADORA2A, ADOR; adenosine receptor A2a

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2723 lncRNA upstream 11072 13074688 ~ 13080021 (+) True G2250
TU2631 lncRNA upstream 187471 12902635 ~ 12903622 (+) False AMCG00003643
TU2587 lncRNA upstream 703035 12387603 ~ 12388058 (+) True G2139
TU2565 lncRNA upstream 831450 12220322 ~ 12259643 (+) True G2125
TU2511 lncRNA upstream 1002107 12087537 ~ 12088986 (+) True G2086
TU2742 lncRNA downstream 6467 13098561 ~ 13101316 (+) True G2264
TU2745 lncRNA downstream 10363 13102457 ~ 13102666 (+) True G2267
TU2760 lncRNA downstream 135141 13227235 ~ 13228357 (+) True G2281
TU2780 lncRNA downstream 155215 13247309 ~ 13254443 (+) True G2294
TU2819 lncRNA downstream 322837 13414931 ~ 13415156 (+) True G2323
AMCG00003647 mRNA upstream 35912 13053429 ~ 13055181 (+) True AMCG00003647
AMCG00003648 mRNA upstream 53495 13025569 ~ 13037598 (+) False AMCG00003648
AMCG00003649 mRNA upstream 66854 13020377 ~ 13024239 (+) True AMCG00003649
AMCG00003641 mRNA upstream 165037 12918837 ~ 12926056 (+) True AMCG00003641
AMCG00003643 mRNA upstream 174091 12902566 ~ 12917002 (+) True AMCG00003643
AMCG00003655 mRNA downstream 64140 13156234 ~ 13206839 (+) True AMCG00003655
AMCG00003654 mRNA downstream 149957 13242051 ~ 13246855 (+) True AMCG00003654
AMCG00003656 mRNA downstream 228109 13320203 ~ 13325222 (+) True AMCG00003656
AMCG00003666 mRNA downstream 645508 13737602 ~ 13744368 (+) True AMCG00003666
AMCG00003668 mRNA downstream 705185 13797279 ~ 13797599 (+) True AMCG00003668
TU2685 other upstream 48496 13037437 ~ 13042597 (+) True AMCG00003648
TU2385 other upstream 1513764 11573731 ~ 11577329 (+) True G1989
TU2334 other upstream 1599650 11490185 ~ 11491443 (+) False AMCG00003606
TU1883 other upstream 3310191 9777508 ~ 9780902 (+) True AMCG00003570
TU1763 other upstream 3827625 9255828 ~ 9263468 (+) True AMCG00003551
TU2754 other downstream 62966 13155060 ~ 13156627 (+) False AMCG00003655
TU2954 other downstream 1326422 14418516 ~ 14419732 (+) True G2440
TU3283 other downstream 2943569 16035663 ~ 16039640 (+) False AMCG00003712
TU3719 other downstream 4589723 17681817 ~ 17683988 (+) True G3047
TU3792 other downstream 5045661 18137755 ~ 18142633 (+) True AMCG00003779

Expression Profile