RNA id: AMCG00003657


Basic Information

Item Value
RNA id AMCG00003657
length 408
RNA type mRNA
GC content 0.59
exon number 2
gene id AMCG00003657
representative True

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 13281451 ~ 13283514 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

atgcaGGCCAACGGGGCAGGACAGGGACAAGACCAGGAGCTCTCCTGCCTGACTGCCGCACAGAACGGGGAGTCCTCCTCCGCCGGGGGAGCGCATTCAAACGGACTGATAGCCAATAATAACGGGAATAATGTCAGTACTAATAACGGGGCTGCGACGGGGGCTCCCTCCGGGGCCCCTGCCTCCTCCAGCGCCGCCGCCTGCGGCTCGGAGGTTGGGGTCAccatgaagaagaagaagcggCTCTCGCAGTCTGAGGAAGATGTCATCAGACTGATAGGGCAGCATCTGCACGGGTTAGGGCTTAACCAAACAGTTGATCTGTTAATGCAAGAGTCTGGATGTCGTTTGGAGCACCCAGCTGCCACCAAATTCCGAAACCACGTCATGGAGGGGGAGTGGGACAAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2776 lncRNA downstream 44458 13233495 ~ 13236993 (-) True G2291
TU2772 lncRNA downstream 103279 13172632 ~ 13178172 (-) False G2287
TU2771 lncRNA downstream 103279 13177460 ~ 13178172 (-) True G2287
TU2769 lncRNA downstream 137923 13131620 ~ 13143528 (-) True G2285
TU2744 lncRNA downstream 180133 13100512 ~ 13101318 (-) True G2266
TU2820 lncRNA upstream 131347 13414861 ~ 13415156 (-) True G2324
TU2833 lncRNA upstream 224378 13507892 ~ 13508930 (-) True G2337
TU2847 lncRNA upstream 445933 13729447 ~ 13732039 (-) False AMCG00003667
TU2957 lncRNA upstream 1125722 14409236 ~ 14410253 (-) True G2443
TU2958 lncRNA upstream 1131865 14415379 ~ 14415673 (-) True G2444
AMCG00003658 mRNA downstream 11206 13251098 ~ 13270245 (-) True AMCG00003658
AMCG00003661 mRNA downstream 45404 13234073 ~ 13236047 (-) True AMCG00003661
AMCG00003660 mRNA downstream 47835 13217541 ~ 13233616 (-) True AMCG00003660
AMCG00003662 mRNA downstream 69271 13117366 ~ 13212180 (-) True AMCG00003662
AMCG00003652 mRNA downstream 164791 13080192 ~ 13116660 (-) True AMCG00003652
AMCG00003659 mRNA upstream 6785 13290299 ~ 13316898 (-) True AMCG00003659
AMCG00003663 mRNA upstream 104293 13387807 ~ 13398847 (-) True AMCG00003663
AMCG00003664 mRNA upstream 226277 13509791 ~ 13514900 (-) True AMCG00003664
AMCG00003665 mRNA upstream 261837 13545351 ~ 13562197 (-) True AMCG00003665
AMCG00003667 mRNA upstream 381229 13664743 ~ 13729698 (-) True AMCG00003667
TU2747 other downstream 170323 13104356 ~ 13111128 (-) False AMCG00003652
TU2704 other downstream 245962 13034953 ~ 13035489 (-) True G2236
TU2508 other downstream 1203299 12076038 ~ 12078152 (-) False AMCG00003625
TU2480 other downstream 1341668 11923808 ~ 11939783 (-) True AMCG00003623
TU2225 other downstream 2176779 11103326 ~ 11104672 (-) False AMCG00003595
TU2876 other upstream 725944 14009458 ~ 14013021 (-) True G2373
TU3027 other upstream 1527272 14810786 ~ 14811331 (-) True G2500
TU3242 other upstream 2232159 15515673 ~ 15591730 (-) True G2665
TU3879 other upstream 4659063 17942577 ~ 17944942 (-) True G3181
TU3909 other upstream 4863146 18146660 ~ 18152381 (-) True AMCG00003782

Expression Profile