RNA id: AMCG00003661


Basic Information

Item Value
RNA id AMCG00003661
length 229
RNA type mRNA
GC content 0.64
exon number 2
gene id AMCG00003661
representative True

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 13234073 ~ 13236047 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CTGTTCCTCAGTGGGCCTGACAGGAACCAAGCTGGGCTGTGCTGAGGGAGGGTGCGGCGCTTGCACAGTGATGGTCTCCACAAACTACACACTTGCAGCAGGGGACCTCATCACTCTTACCCAGCCGCGCAGTGCCAGCGCCAGTGCCAGCGCCAGTGCCAGCGCCAGTGCCAGCgccagtgccagtgccagtgccagCGCCAGTGCCAGTGATCACTTCAGTCCCCTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2772 lncRNA downstream 55901 13172632 ~ 13178172 (-) False G2287
TU2771 lncRNA downstream 55901 13177460 ~ 13178172 (-) True G2287
TU2769 lncRNA downstream 90545 13131620 ~ 13143528 (-) True G2285
TU2744 lncRNA downstream 132755 13100512 ~ 13101318 (-) True G2266
TU2734 lncRNA downstream 154052 13077648 ~ 13080021 (-) True G2257
TU2820 lncRNA upstream 178814 13414861 ~ 13415156 (-) True G2324
TU2833 lncRNA upstream 271845 13507892 ~ 13508930 (-) True G2337
TU2847 lncRNA upstream 493400 13729447 ~ 13732039 (-) False AMCG00003667
TU2957 lncRNA upstream 1173189 14409236 ~ 14410253 (-) True G2443
TU2958 lncRNA upstream 1179332 14415379 ~ 14415673 (-) True G2444
AMCG00003660 mRNA downstream 457 13217541 ~ 13233616 (-) True AMCG00003660
AMCG00003662 mRNA downstream 21893 13117366 ~ 13212180 (-) True AMCG00003662
AMCG00003652 mRNA downstream 117413 13080192 ~ 13116660 (-) True AMCG00003652
AMCG00003651 mRNA downstream 168519 13055994 ~ 13065554 (-) True AMCG00003651
AMCG00003650 mRNA downstream 183681 13037692 ~ 13050392 (-) True AMCG00003650
AMCG00003658 mRNA upstream 15051 13251098 ~ 13270245 (-) True AMCG00003658
AMCG00003657 mRNA upstream 45404 13281451 ~ 13283514 (-) True AMCG00003657
AMCG00003659 mRNA upstream 54252 13290299 ~ 13316898 (-) True AMCG00003659
AMCG00003663 mRNA upstream 151760 13387807 ~ 13398847 (-) True AMCG00003663
AMCG00003664 mRNA upstream 273744 13509791 ~ 13514900 (-) True AMCG00003664
TU2747 other downstream 122945 13104356 ~ 13111128 (-) False AMCG00003652
TU2704 other downstream 198584 13034953 ~ 13035489 (-) True G2236
TU2508 other downstream 1155921 12076038 ~ 12078152 (-) False AMCG00003625
TU2480 other downstream 1294290 11923808 ~ 11939783 (-) True AMCG00003623
TU2225 other downstream 2129401 11103326 ~ 11104672 (-) False AMCG00003595
TU2876 other upstream 773411 14009458 ~ 14013021 (-) True G2373
TU3027 other upstream 1574739 14810786 ~ 14811331 (-) True G2500
TU3242 other upstream 2279626 15515673 ~ 15591730 (-) True G2665
TU3879 other upstream 4706530 17942577 ~ 17944942 (-) True G3181
TU3909 other upstream 4910613 18146660 ~ 18152381 (-) True AMCG00003782

Expression Profile