RNA id: AMCG00003676



Basic Information


Item Value
RNA id AMCG00003676
length 339
RNA type mRNA
GC content 0.53
exon number 3
gene id AMCG00003676
representative True

Chromosome Information


Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 14220132 ~ 14222904 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTCCGTAGTTTTCTCTGCTCTAATTCGTCTGCATTGTTCGACAGCTCCAGATGGCGTGCTGCCTCCTAGGCTGTCATCTGCCACCCCGACCAGTCTTCAGGTTGTCTGGTCTGCACCAGTTCGCAACAATGCTCCAGGCCTGCCCAGATACCAACTCCAGAGGAAGGCAGATCATTCCACTGGTGACATTCTACAGCTCCTGGACAATGTAACTACTACTTTCAGTTACATGGCCGTTGGTCTCGAGCCATACACATCGTATGAGTTCAGGCTGATTGTCTCCAATGCCTATGGACACACGGTCAGTGAGTGGACACGCATGGTCACGGCAGAGGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2884 lncRNA upstream 140805 14079112 ~ 14079327 (+) True G2380
TU2832 lncRNA upstream 678978 13539972 ~ 13541154 (+) True G2336
TU2830 lncRNA upstream 705067 13514660 ~ 13515065 (+) True G2334
TU2829 lncRNA upstream 707134 13512600 ~ 13512998 (+) True G2333
TU2828 lncRNA upstream 707601 13512194 ~ 13512531 (+) True G2332
TU2960 lncRNA downstream 197827 14420731 ~ 14421310 (+) True G2446
TU3032 lncRNA downstream 628848 14851752 ~ 14866698 (+) True AMCG00003690
TU3058 lncRNA downstream 783442 15006346 ~ 15030368 (+) True G2517
TU3118 lncRNA downstream 891725 15114629 ~ 15114837 (+) True G2563
TU3119 lncRNA downstream 892801 15115705 ~ 15116972 (+) True G2564
AMCG00003675 mRNA upstream 15732 14191868 ~ 14204400 (+) True AMCG00003675
AMCG00003673 mRNA upstream 30034 14092013 ~ 14190098 (+) True AMCG00003673
AMCG00003669 mRNA upstream 152438 14056451 ~ 14067694 (+) True AMCG00003669
AMCG00003670 mRNA upstream 207086 14009471 ~ 14013046 (+) True AMCG00003670
AMCG00003668 mRNA upstream 422533 13797279 ~ 13797599 (+) True AMCG00003668
AMCG00003671 mRNA downstream 11030 14233934 ~ 14292763 (+) True AMCG00003671
AMCG00003672 mRNA downstream 76663 14299567 ~ 14328685 (+) True AMCG00003672
AMCG00003674 mRNA downstream 106626 14329530 ~ 14335669 (+) True AMCG00003674
AMCG00003679 mRNA downstream 143412 14366316 ~ 14382592 (+) True AMCG00003679
AMCG00003680 mRNA downstream 162234 14385138 ~ 14388550 (+) True AMCG00003680
TU2754 other upstream 1063505 13155060 ~ 13156627 (+) False AMCG00003655
TU2685 other upstream 1177535 13037437 ~ 13042597 (+) True AMCG00003648
TU2385 other upstream 2642803 11573731 ~ 11577329 (+) True G1989
TU2334 other upstream 2728689 11490185 ~ 11491443 (+) False AMCG00003606
TU1883 other upstream 4439230 9777508 ~ 9780902 (+) True AMCG00003570
TU2954 other downstream 195612 14418516 ~ 14419732 (+) True G2440
TU3283 other downstream 1812759 16035663 ~ 16039640 (+) False AMCG00003712
TU3719 other downstream 3458913 17681817 ~ 17683988 (+) True G3047
TU3792 other downstream 3914851 18137755 ~ 18142633 (+) True AMCG00003779
TU3794 other downstream 3923756 18146660 ~ 18152314 (+) True G3108

Expression Profile