Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00003681 |
| length | 1080 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 4 |
| gene id | AMCG00003681 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 14555990 ~ 14558193 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0003140 | determination of left/right asymmetry in lateral mesoderm | biological_process |
| GO:0035050 | embryonic heart tube development | biological_process |
| GO:0009953 | dorsal/ventral pattern formation | biological_process |
| GO:0035462 | determination of left/right asymmetry in diencephalon | biological_process |
| GO:0016049 | cell growth | biological_process |
| GO:0061371 | determination of heart left/right asymmetry | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| GO:0005160 | transforming growth factor beta receptor binding | molecular_function |
| GO:0008083 | growth factor activity | molecular_function |
| id | description |
|---|---|
| K04668 | LEFTY; left-right determination factor |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2960 | lncRNA | upstream | 134680 | 14420731 ~ 14421310 (+) | True | G2446 |
| TU2884 | lncRNA | upstream | 476663 | 14079112 ~ 14079327 (+) | True | G2380 |
| TU2832 | lncRNA | upstream | 1014836 | 13539972 ~ 13541154 (+) | True | G2336 |
| TU2830 | lncRNA | upstream | 1040925 | 13514660 ~ 13515065 (+) | True | G2334 |
| TU2829 | lncRNA | upstream | 1042992 | 13512600 ~ 13512998 (+) | True | G2333 |
| TU3032 | lncRNA | downstream | 293559 | 14851752 ~ 14866698 (+) | True | AMCG00003690 |
| TU3058 | lncRNA | downstream | 448153 | 15006346 ~ 15030368 (+) | True | G2517 |
| TU3118 | lncRNA | downstream | 556436 | 15114629 ~ 15114837 (+) | True | G2563 |
| TU3119 | lncRNA | downstream | 557512 | 15115705 ~ 15116972 (+) | True | G2564 |
| TU3126 | lncRNA | downstream | 570403 | 15128596 ~ 15130200 (+) | True | G2571 |
| AMCG00003683 | mRNA | upstream | 7862 | 14540544 ~ 14548128 (+) | True | AMCG00003683 |
| AMCG00003678 | mRNA | upstream | 139907 | 14408429 ~ 14416083 (+) | True | AMCG00003678 |
| AMCG00003680 | mRNA | upstream | 167440 | 14385138 ~ 14388550 (+) | True | AMCG00003680 |
| AMCG00003679 | mRNA | upstream | 173398 | 14366316 ~ 14382592 (+) | True | AMCG00003679 |
| AMCG00003674 | mRNA | upstream | 220321 | 14329530 ~ 14335669 (+) | True | AMCG00003674 |
| AMCG00003682 | mRNA | downstream | 6335 | 14564528 ~ 14580910 (+) | True | AMCG00003682 |
| AMCG00003688 | mRNA | downstream | 49793 | 14607986 ~ 14617192 (+) | True | AMCG00003688 |
| AMCG00003690 | mRNA | downstream | 295088 | 14853281 ~ 14866758 (+) | False | AMCG00003690 |
| AMCG00003691 | mRNA | downstream | 438704 | 14996897 ~ 15005277 (+) | True | AMCG00003691 |
| AMCG00003696 | mRNA | downstream | 461215 | 15019408 ~ 15054371 (+) | True | AMCG00003696 |
| TU2954 | other | upstream | 136258 | 14418516 ~ 14419732 (+) | True | G2440 |
| TU2754 | other | upstream | 1399363 | 13155060 ~ 13156627 (+) | False | AMCG00003655 |
| TU2685 | other | upstream | 1513393 | 13037437 ~ 13042597 (+) | True | AMCG00003648 |
| TU2385 | other | upstream | 2978661 | 11573731 ~ 11577329 (+) | True | G1989 |
| TU2334 | other | upstream | 3064547 | 11490185 ~ 11491443 (+) | False | AMCG00003606 |
| TU3283 | other | downstream | 1477470 | 16035663 ~ 16039640 (+) | False | AMCG00003712 |
| TU3719 | other | downstream | 3123624 | 17681817 ~ 17683988 (+) | True | G3047 |
| TU3792 | other | downstream | 3579562 | 18137755 ~ 18142633 (+) | True | AMCG00003779 |
| TU3794 | other | downstream | 3588467 | 18146660 ~ 18152314 (+) | True | G3108 |
| TU4227 | other | downstream | 4810000 | 19368193 ~ 19369266 (+) | False | AMCG00003828 |
