RNA id: AMCG00003684


Basic Information

Item Value
RNA id AMCG00003684
length 327
RNA type mRNA
GC content 0.49
exon number 3
gene id AMCG00003684
representative True

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 14476924 ~ 14483379 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gttGCTGTGGTTAAGGTGAAGAATGCCGACAAAGTGTTTGCCATGAAGATTCTCAACAAGTGGGAGATGCTGAAGAGAGCCGAGACGGCCTGCTTTAGGGAAGAGAGAGACGTACTAGTAAATGGAGACAGCCAGTGGATCACAACATTGCACTATGCCTTCCAGGATGATAACTACTTGTATCTCGTTATGGATTACTACGTGGGCGGAGACCTGCTGACGCTGCTCAGTAAATTTGAAGACCGGCTGCCCGAGGAGATGGCACGCTTCTACCTGGCAGAAATGGTTCTAGCAATTGATTCTGTGCATCAGCTACACTACGTTCAc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2961 lncRNA downstream 55609 14420731 ~ 14421315 (-) True G2447
TU2959 lncRNA downstream 57192 14418578 ~ 14419732 (-) True G2445
TU2958 lncRNA downstream 61251 14415379 ~ 14415673 (-) True G2444
TU2957 lncRNA downstream 66671 14409236 ~ 14410253 (-) True G2443
TU2847 lncRNA downstream 744885 13729447 ~ 13732039 (-) False AMCG00003667
TU3021 lncRNA upstream 215580 14698959 ~ 14699237 (-) True G2494
TU3120 lncRNA upstream 632604 15115983 ~ 15116183 (-) True G2565
TU3188 lncRNA upstream 832017 15315396 ~ 15318210 (-) True G2615
TU3212 lncRNA upstream 894818 15378197 ~ 15378555 (-) True G2636
TU3213 lncRNA upstream 895379 15378758 ~ 15378981 (-) True G2637
AMCG00003686 mRNA downstream 15341 14426285 ~ 14461583 (-) True AMCG00003686
AMCG00003685 mRNA downstream 82020 14387555 ~ 14394904 (-) True AMCG00003685
AMCG00003677 mRNA downstream 122391 14338426 ~ 14354533 (-) True AMCG00003677
AMCG00003667 mRNA downstream 747226 13664743 ~ 13729698 (-) True AMCG00003667
AMCG00003665 mRNA downstream 914727 13545351 ~ 13562197 (-) True AMCG00003665
AMCG00003687 mRNA upstream 45262 14528641 ~ 14531680 (-) True AMCG00003687
AMCG00003689 mRNA upstream 134084 14617463 ~ 14644456 (-) True AMCG00003689
AMCG00003692 mRNA upstream 523038 15006417 ~ 15016678 (-) True AMCG00003692
AMCG00003698 mRNA upstream 638390 15121769 ~ 15133784 (-) True AMCG00003698
AMCG00003700 mRNA upstream 658856 15142235 ~ 15143695 (-) True AMCG00003700
TU2876 other downstream 463903 14009458 ~ 14013021 (-) True G2373
TU2747 other downstream 1365796 13104356 ~ 13111128 (-) False AMCG00003652
TU2704 other downstream 1441435 13034953 ~ 13035489 (-) True G2236
TU2508 other downstream 2398772 12076038 ~ 12078152 (-) False AMCG00003625
TU2480 other downstream 2537141 11923808 ~ 11939783 (-) True AMCG00003623
TU3027 other upstream 327407 14810786 ~ 14811331 (-) True G2500
TU3242 other upstream 1032294 15515673 ~ 15591730 (-) True G2665
TU3879 other upstream 3459198 17942577 ~ 17944942 (-) True G3181
TU3909 other upstream 3663281 18146660 ~ 18152381 (-) True AMCG00003782
TU4265 other upstream 4941584 19424963 ~ 19425366 (-) True G3517

Expression Profile