RNA id: AMCG00003687


Basic Information

Item Value
RNA id AMCG00003687
length 345
RNA type mRNA
GC content 0.53
exon number 2
gene id AMCG00003687
representative True

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 14528641 ~ 14531680 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTCCGGGGAGGTGCGTTTGAAGAAGCTGGAGCAGCTGCTTTTGGACGGGCCGGCTCAGTCCAATGGgcagtgctgcagtgtggagACATTGCTGGATGTCCTCGTCTGTCTCTATGATGAGTGCATCAACTCCCCGCTTAGGAGAGAGAAGAATGTGTCCGACTTTCTGGATTGGGAGCTTTGTGACAGCAGTCATTTCTGTGCTTGGTACTGGCAGCTGCAGGAAACCCAGGGCCATGCCTGTATGAGGTCATCCCAGGAAGCCAGTATAGCTCTGCTGACGGACTTGTGCAGAATTGTCGTGCAAACCCTGTGTGACAGGCTGCAAGTGAAAGAGAATTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2961 lncRNA downstream 107326 14420731 ~ 14421315 (-) True G2447
TU2959 lncRNA downstream 108909 14418578 ~ 14419732 (-) True G2445
TU2958 lncRNA downstream 112968 14415379 ~ 14415673 (-) True G2444
TU2957 lncRNA downstream 118388 14409236 ~ 14410253 (-) True G2443
TU2847 lncRNA downstream 796602 13729447 ~ 13732039 (-) False AMCG00003667
TU3021 lncRNA upstream 167279 14698959 ~ 14699237 (-) True G2494
TU3120 lncRNA upstream 584303 15115983 ~ 15116183 (-) True G2565
TU3188 lncRNA upstream 783716 15315396 ~ 15318210 (-) True G2615
TU3212 lncRNA upstream 846517 15378197 ~ 15378555 (-) True G2636
TU3213 lncRNA upstream 847078 15378758 ~ 15378981 (-) True G2637
AMCG00003684 mRNA downstream 45262 14476924 ~ 14483379 (-) True AMCG00003684
AMCG00003686 mRNA downstream 67058 14426285 ~ 14461583 (-) True AMCG00003686
AMCG00003685 mRNA downstream 133737 14387555 ~ 14394904 (-) True AMCG00003685
AMCG00003677 mRNA downstream 174108 14338426 ~ 14354533 (-) True AMCG00003677
AMCG00003667 mRNA downstream 798943 13664743 ~ 13729698 (-) True AMCG00003667
AMCG00003689 mRNA upstream 85783 14617463 ~ 14644456 (-) True AMCG00003689
AMCG00003692 mRNA upstream 474737 15006417 ~ 15016678 (-) True AMCG00003692
AMCG00003698 mRNA upstream 590089 15121769 ~ 15133784 (-) True AMCG00003698
AMCG00003700 mRNA upstream 610555 15142235 ~ 15143695 (-) True AMCG00003700
AMCG00003699 mRNA upstream 625814 15157494 ~ 15159317 (-) True AMCG00003699
TU2876 other downstream 515620 14009458 ~ 14013021 (-) True G2373
TU2747 other downstream 1417513 13104356 ~ 13111128 (-) False AMCG00003652
TU2704 other downstream 1493152 13034953 ~ 13035489 (-) True G2236
TU2508 other downstream 2450489 12076038 ~ 12078152 (-) False AMCG00003625
TU2480 other downstream 2588858 11923808 ~ 11939783 (-) True AMCG00003623
TU3027 other upstream 279106 14810786 ~ 14811331 (-) True G2500
TU3242 other upstream 983993 15515673 ~ 15591730 (-) True G2665
TU3879 other upstream 3410897 17942577 ~ 17944942 (-) True G3181
TU3909 other upstream 3614980 18146660 ~ 18152381 (-) True AMCG00003782
TU4265 other upstream 4893283 19424963 ~ 19425366 (-) True G3517

Expression Profile