Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00003779 |
| length | 1034 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 7 |
| gene id | AMCG00003779 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 18131919 ~ 18142633 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006508 | proteolysis | biological_process |
| GO:0050790 | regulation of catalytic activity | biological_process |
| GO:0004197 | cysteine-type endopeptidase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU3614 | lncRNA | upstream | 875469 | 17254266 ~ 17256450 (+) | True | G2967 |
| TU3591 | lncRNA | upstream | 921878 | 17208035 ~ 17210041 (+) | True | G2945 |
| TU3513 | lncRNA | upstream | 1089355 | 17041113 ~ 17042564 (+) | False | AMCG00003744 |
| TU3493 | lncRNA | upstream | 1197899 | 16868299 ~ 16934020 (+) | True | G2861 |
| TU3458 | lncRNA | upstream | 1532590 | 16599058 ~ 16599329 (+) | True | G2836 |
| TU3977 | lncRNA | downstream | 299432 | 18438806 ~ 18439666 (+) | True | G3265 |
| TU3983 | lncRNA | downstream | 405610 | 18544984 ~ 18545538 (+) | True | G3269 |
| TU4091 | lncRNA | downstream | 806208 | 18945582 ~ 18946131 (+) | True | G3370 |
| TU4095 | lncRNA | downstream | 810380 | 18949754 ~ 18950254 (+) | True | G3373 |
| TU4101 | lncRNA | downstream | 811878 | 18951252 ~ 18971124 (+) | True | G3375 |
| AMCG00003771 | mRNA | upstream | 161329 | 17954298 ~ 17970590 (+) | True | AMCG00003771 |
| AMCG00003775 | mRNA | upstream | 181780 | 17942587 ~ 17950139 (+) | True | AMCG00003775 |
| AMCG00003774 | mRNA | upstream | 193021 | 17933862 ~ 17938898 (+) | True | AMCG00003774 |
| AMCG00003772 | mRNA | upstream | 215856 | 17899908 ~ 17916063 (+) | True | AMCG00003772 |
| AMCG00003773 | mRNA | upstream | 243076 | 17881204 ~ 17888843 (+) | True | AMCG00003773 |
| AMCG00003786 | mRNA | downstream | 54909 | 18194283 ~ 18199528 (+) | True | AMCG00003786 |
| AMCG00003787 | mRNA | downstream | 63063 | 18202437 ~ 18208797 (+) | True | AMCG00003787 |
| AMCG00003785 | mRNA | downstream | 137084 | 18276458 ~ 18279829 (+) | True | AMCG00003785 |
| AMCG00003790 | mRNA | downstream | 149526 | 18288900 ~ 18320263 (+) | True | AMCG00003790 |
| AMCG00003798 | mRNA | downstream | 208517 | 18347891 ~ 18348131 (+) | True | AMCG00003798 |
| TU3719 | other | upstream | 447931 | 17681817 ~ 17683988 (+) | True | G3047 |
| TU3283 | other | upstream | 2092279 | 16035663 ~ 16039640 (+) | False | AMCG00003712 |
| TU2954 | other | upstream | 3712187 | 14418516 ~ 14419732 (+) | True | G2440 |
| TU2754 | other | upstream | 4975292 | 13155060 ~ 13156627 (+) | False | AMCG00003655 |
| TU2685 | other | upstream | 5089322 | 13037437 ~ 13042597 (+) | True | AMCG00003648 |
| TU3794 | other | downstream | 7286 | 18146660 ~ 18152314 (+) | True | G3108 |
| TU4227 | other | downstream | 1228819 | 19368193 ~ 19369266 (+) | False | AMCG00003828 |
| TU4541 | other | downstream | 3409827 | 21549201 ~ 21549533 (+) | True | G3751 |
| TU4563 | other | downstream | 3606476 | 21745850 ~ 21760630 (+) | True | G3771 |
| TU4606 | other | downstream | 3783262 | 21922636 ~ 21923787 (+) | True | G3799 |
