RNA id: AMCG00003798



Basic Information


Item Value
RNA id AMCG00003798
length 183
RNA type mRNA
GC content 0.45
exon number 2
gene id AMCG00003798
representative True

Chromosome Information


Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 18347891 ~ 18348131 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TGTCTGGTCTGTAGCAGTGTGAACTCCATTGGAATCATCAAGGAGCAAGTAGAGAATCTGTCTGTCTTGAGAAATAAGGTGAGGAAACATGCTTTGTCTAAGGTCCACACTCAAGTTGTGAAGATGGCAGAACAACAGAAAGAAGCGGTCATTGAGAATGCGGTGGAGGCTATGACTGAGTCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU3614 lncRNA upstream 1091441 17254266 ~ 17256450 (+) True G2967
TU3591 lncRNA upstream 1137850 17208035 ~ 17210041 (+) True G2945
TU3513 lncRNA upstream 1305327 17041113 ~ 17042564 (+) False AMCG00003744
TU3493 lncRNA upstream 1413871 16868299 ~ 16934020 (+) True G2861
TU3458 lncRNA upstream 1748562 16599058 ~ 16599329 (+) True G2836
TU3977 lncRNA downstream 90675 18438806 ~ 18439666 (+) True G3265
TU3983 lncRNA downstream 196853 18544984 ~ 18545538 (+) True G3269
TU4091 lncRNA downstream 597451 18945582 ~ 18946131 (+) True G3370
TU4095 lncRNA downstream 601623 18949754 ~ 18950254 (+) True G3373
TU4101 lncRNA downstream 603121 18951252 ~ 18971124 (+) True G3375
AMCG00003790 mRNA upstream 27628 18288900 ~ 18320263 (+) True AMCG00003790
AMCG00003785 mRNA upstream 68062 18276458 ~ 18279829 (+) True AMCG00003785
AMCG00003787 mRNA upstream 139094 18202437 ~ 18208797 (+) True AMCG00003787
AMCG00003786 mRNA upstream 148363 18194283 ~ 18199528 (+) True AMCG00003786
AMCG00003779 mRNA upstream 208517 18131919 ~ 18139374 (+) False AMCG00003779
AMCG00003797 mRNA downstream 4 18348135 ~ 18349366 (+) True AMCG00003797
AMCG00003795 mRNA downstream 50124 18398255 ~ 18419500 (+) True AMCG00003795
AMCG00003800 mRNA downstream 274748 18622879 ~ 18668138 (+) True AMCG00003800
AMCG00003799 mRNA downstream 322593 18670724 ~ 18682733 (+) True AMCG00003799
AMCG00003804 mRNA downstream 353512 18701643 ~ 18779760 (+) True AMCG00003804
TU3794 other upstream 195577 18146660 ~ 18152314 (+) True G3108
TU3792 other upstream 205258 18137755 ~ 18142633 (+) True AMCG00003779
TU3719 other upstream 663903 17681817 ~ 17683988 (+) True G3047
TU3283 other upstream 2308251 16035663 ~ 16039640 (+) False AMCG00003712
TU2954 other upstream 3928159 14418516 ~ 14419732 (+) True G2440
TU4227 other downstream 1020062 19368193 ~ 19369266 (+) False AMCG00003828
TU4541 other downstream 3201070 21549201 ~ 21549533 (+) True G3751
TU4563 other downstream 3397719 21745850 ~ 21760630 (+) True G3771
TU4606 other downstream 3574505 21922636 ~ 21923787 (+) True G3799
TU5028 other downstream 5362107 23710238 ~ 23713134 (+) False AMCG00003898

Expression Profile