Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00003843 |
| length | 1212 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 8 |
| gene id | AMCG00003843 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 21314074 ~ 21333224 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0045995 | regulation of embryonic development | biological_process |
| GO:0030155 | regulation of cell adhesion | biological_process |
| GO:0016203 | muscle attachment | biological_process |
| GO:0030334 | regulation of cell migration | biological_process |
| GO:0005606 | laminin-1 complex | cellular_component |
| GO:0005102 | signaling receptor binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU4463 | lncRNA | upstream | 223820 | 21089595 ~ 21090254 (+) | True | G3690 |
| TU4443 | lncRNA | upstream | 386272 | 20925812 ~ 20927802 (+) | True | G3670 |
| TU4439 | lncRNA | upstream | 401086 | 20912142 ~ 20912988 (+) | True | G3666 |
| TU4432 | lncRNA | upstream | 405557 | 20903572 ~ 20908517 (+) | True | G3661 |
| TU4413 | lncRNA | upstream | 453780 | 20835737 ~ 20860294 (+) | True | G3648 |
| TU4545 | lncRNA | downstream | 262632 | 21595856 ~ 21598430 (+) | True | G3754 |
| TU4549 | lncRNA | downstream | 267408 | 21600632 ~ 21600860 (+) | True | G3757 |
| TU4559 | lncRNA | downstream | 399267 | 21732491 ~ 21732699 (+) | True | G3767 |
| TU4562 | lncRNA | downstream | 417303 | 21750527 ~ 21759799 (+) | True | G3770 |
| TU4577 | lncRNA | downstream | 557299 | 21890523 ~ 21901648 (+) | False | AMCG00003853 |
| AMCG00003844 | mRNA | upstream | 17856 | 21288460 ~ 21296218 (+) | True | AMCG00003844 |
| AMCG00003836 | mRNA | upstream | 980538 | 20333123 ~ 20333536 (+) | True | AMCG00003836 |
| AMCG00003835 | mRNA | upstream | 1180719 | 20132773 ~ 20133355 (+) | True | AMCG00003835 |
| AMCG00003833 | mRNA | upstream | 1369057 | 19944010 ~ 19945017 (+) | True | AMCG00003833 |
| AMCG00003832 | mRNA | upstream | 1370237 | 19933174 ~ 19943837 (+) | True | AMCG00003832 |
| AMCG00003845 | mRNA | downstream | 15003 | 21348227 ~ 21438679 (+) | True | AMCG00003845 |
| AMCG00003846 | mRNA | downstream | 106890 | 21440114 ~ 21447121 (+) | True | AMCG00003846 |
| AMCG00003847 | mRNA | downstream | 158660 | 21491884 ~ 21535758 (+) | True | AMCG00003847 |
| AMCG00003854 | mRNA | downstream | 524266 | 21857490 ~ 21862799 (+) | True | AMCG00003854 |
| AMCG00003853 | mRNA | downstream | 557335 | 21890559 ~ 21901865 (+) | True | AMCG00003853 |
| TU4227 | other | upstream | 1944808 | 19368193 ~ 19369266 (+) | False | AMCG00003828 |
| TU3794 | other | upstream | 3161760 | 18146660 ~ 18152314 (+) | True | G3108 |
| TU3792 | other | upstream | 3171441 | 18137755 ~ 18142633 (+) | True | AMCG00003779 |
| TU3719 | other | upstream | 3630086 | 17681817 ~ 17683988 (+) | True | G3047 |
| TU3283 | other | upstream | 5274434 | 16035663 ~ 16039640 (+) | False | AMCG00003712 |
| TU4541 | other | downstream | 215977 | 21549201 ~ 21549533 (+) | True | G3751 |
| TU4563 | other | downstream | 412626 | 21745850 ~ 21760630 (+) | True | G3771 |
| TU4606 | other | downstream | 589412 | 21922636 ~ 21923787 (+) | True | G3799 |
| TU5028 | other | downstream | 2377014 | 23710238 ~ 23713134 (+) | False | AMCG00003898 |
| TU5311 | other | downstream | 3350176 | 24683400 ~ 24683920 (+) | True | G4360 |
