Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00003943 |
| length | 1205 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 8 |
| gene id | AMCG00003943 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 25939882 ~ 25943047 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006457 | protein folding | biological_process |
| GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | molecular_function |
| id | description |
|---|---|
| K12739 | PPIL6; peptidyl-prolyl cis-trans isomerase-like 6 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU5526 | lncRNA | upstream | 10202 | 25929467 ~ 25929680 (+) | True | G4526 |
| TU5503 | lncRNA | upstream | 51569 | 25814291 ~ 25888313 (+) | True | G4512 |
| TU5466 | lncRNA | upstream | 329586 | 25610078 ~ 25610296 (+) | True | G4482 |
| TU5432 | lncRNA | upstream | 385793 | 25481598 ~ 25554089 (+) | True | G4452 |
| TU5313 | lncRNA | upstream | 1252745 | 24685016 ~ 24687137 (+) | True | G4362 |
| TU5542 | lncRNA | downstream | 1096 | 25944143 ~ 25944352 (+) | True | G4536 |
| TU5581 | lncRNA | downstream | 140282 | 26083329 ~ 26085122 (+) | True | AMCG00003948 |
| TU5608 | lncRNA | downstream | 282446 | 26225493 ~ 26227500 (+) | True | G4589 |
| TU5609 | lncRNA | downstream | 285881 | 26228928 ~ 26229252 (+) | True | G4590 |
| TU5611 | lncRNA | downstream | 300615 | 26243662 ~ 26244054 (+) | True | G4592 |
| AMCG00003937 | mRNA | upstream | 1553 | 25933027 ~ 25938329 (+) | True | AMCG00003937 |
| AMCG00003938 | mRNA | upstream | 12743 | 25915420 ~ 25927139 (+) | True | AMCG00003938 |
| AMCG00003939 | mRNA | upstream | 24857 | 25904385 ~ 25915025 (+) | True | AMCG00003939 |
| AMCG00003930 | mRNA | upstream | 144087 | 25785173 ~ 25795795 (+) | True | AMCG00003930 |
| AMCG00003931 | mRNA | upstream | 172094 | 25763983 ~ 25767788 (+) | True | AMCG00003931 |
| AMCG00003944 | mRNA | downstream | 3596 | 25946643 ~ 25965249 (+) | True | AMCG00003944 |
| AMCG00003947 | mRNA | downstream | 76497 | 26019544 ~ 26019825 (+) | True | AMCG00003947 |
| AMCG00003948 | mRNA | downstream | 138236 | 26081283 ~ 26083886 (+) | False | AMCG00003948 |
| AMCG00003954 | mRNA | downstream | 314379 | 26257426 ~ 26257668 (+) | True | AMCG00003954 |
| AMCG00003949 | mRNA | downstream | 329372 | 26272419 ~ 26279485 (+) | True | AMCG00003949 |
| TU5497 | other | upstream | 144091 | 25794052 ~ 25795791 (+) | False | AMCG00003930 |
| TU5311 | other | upstream | 1255962 | 24683400 ~ 24683920 (+) | True | G4360 |
| TU5028 | other | upstream | 2226748 | 23710238 ~ 23713134 (+) | False | AMCG00003898 |
| TU4606 | other | upstream | 4016095 | 21922636 ~ 21923787 (+) | True | G3799 |
| TU4563 | other | upstream | 4179252 | 21745850 ~ 21760630 (+) | True | G3771 |
| TU5898 | other | downstream | 2119316 | 28062363 ~ 28103211 (+) | True | G4831 |
| TU5899 | other | downstream | 2119627 | 28062674 ~ 28067786 (+) | False | G4831 |
| TU6431 | other | downstream | 4328163 | 30271210 ~ 30271524 (+) | True | G5245 |
| TU6554 | other | downstream | 4944948 | 30887995 ~ 30894827 (+) | True | AMCG00004056 |
| TU6919 | other | downstream | 7187073 | 33130120 ~ 33131186 (+) | True | G5642 |
