Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00003999 |
| length | 702 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 5 |
| gene id | AMCG00003999 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 28731909 ~ 28751998 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| K00167 | BCKDHB, bkdA2; 2-oxoisovalerate dehydrogenase E1 component beta subunit |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU6060 | lncRNA | upstream | 67199 | 28664502 ~ 28664710 (+) | False | AMCG00003993 |
| TU6014 | lncRNA | upstream | 154975 | 28568184 ~ 28576934 (+) | False | AMCG00003991 |
| TU6007 | lncRNA | upstream | 262965 | 28466917 ~ 28468944 (+) | True | G4917 |
| TU6005 | lncRNA | upstream | 267059 | 28454433 ~ 28464850 (+) | False | AMCG00003990 |
| TU5991 | lncRNA | upstream | 332221 | 28398863 ~ 28399688 (+) | False | AMCG00003988 |
| TU6083 | lncRNA | downstream | 140686 | 28892684 ~ 28893031 (+) | True | G4981 |
| TU6107 | lncRNA | downstream | 200555 | 28952553 ~ 28953065 (+) | True | G5005 |
| TU6212 | lncRNA | downstream | 602523 | 29354521 ~ 29361679 (+) | True | G5085 |
| TU6230 | lncRNA | downstream | 787215 | 29539213 ~ 29541316 (+) | False | AMCG00004011 |
| TU6278 | lncRNA | downstream | 932229 | 29684227 ~ 29685543 (+) | True | G5129 |
| AMCG00003998 | mRNA | upstream | 876 | 28717782 ~ 28731033 (+) | True | AMCG00003998 |
| AMCG00003994 | mRNA | upstream | 33142 | 28689888 ~ 28698767 (+) | True | AMCG00003994 |
| AMCG00003993 | mRNA | upstream | 47928 | 28640174 ~ 28683981 (+) | True | AMCG00003993 |
| AMCG00003992 | mRNA | upstream | 140316 | 28587831 ~ 28591593 (+) | True | AMCG00003992 |
| AMCG00003991 | mRNA | upstream | 146235 | 28568825 ~ 28585674 (+) | True | AMCG00003991 |
| AMCG00004003 | mRNA | downstream | 330095 | 29082093 ~ 29108404 (+) | True | AMCG00004003 |
| AMCG00004009 | mRNA | downstream | 390764 | 29142762 ~ 29184704 (+) | True | AMCG00004009 |
| AMCG00004007 | mRNA | downstream | 507962 | 29259960 ~ 29265240 (+) | True | AMCG00004007 |
| AMCG00004008 | mRNA | downstream | 553206 | 29305204 ~ 29321613 (+) | True | AMCG00004008 |
| AMCG00004010 | mRNA | downstream | 628585 | 29380583 ~ 29391128 (+) | True | AMCG00004010 |
| TU5898 | other | upstream | 628698 | 28062363 ~ 28103211 (+) | True | G4831 |
| TU5899 | other | upstream | 664123 | 28062674 ~ 28067786 (+) | False | G4831 |
| TU5497 | other | upstream | 2936118 | 25794052 ~ 25795791 (+) | False | AMCG00003930 |
| TU5311 | other | upstream | 4047989 | 24683400 ~ 24683920 (+) | True | G4360 |
| TU5028 | other | upstream | 5018775 | 23710238 ~ 23713134 (+) | False | AMCG00003898 |
| TU6431 | other | downstream | 1519212 | 30271210 ~ 30271524 (+) | True | G5245 |
| TU6554 | other | downstream | 2135997 | 30887995 ~ 30894827 (+) | True | AMCG00004056 |
| TU6919 | other | downstream | 4378122 | 33130120 ~ 33131186 (+) | True | G5642 |
| TU7209 | other | downstream | 6100865 | 34852863 ~ 34870320 (+) | True | AMCG00004138 |
| TU7437 | other | downstream | 7000535 | 35752533 ~ 35766180 (+) | True | AMCG00004158 |
