RNA id: AMCG00004037



Basic Information


Item Value
RNA id AMCG00004037
length 273
RNA type mRNA
GC content 0.51
exon number 3
gene id AMCG00004037
representative True

Chromosome Information


Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 30254370 ~ 30255135 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGACCGTGGAGAGTATGAACAATGCTGGCTTCTTCCGTGGCTCCTACATGACCGCTAAAGGACCAGTTGTCAAGGTGTCTCCTCTGTCTGGATTCCTGAACATTAATGGCAAATCTACTGTGTTTGGATTCCTGGTCAATTGGAGCTTTGTGGAATCCGTGACATCCTGGGTTGGCCAGTGTTTTGTGGACAGCAATGACGTTGAGCACCTGGAGACCATGTGGCTCCTGAGAGGAAACGCAGAATCAGCTGGCGATGATTGGGCACAAGCC

Function


GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU6362 lncRNA upstream 107813 30145855 ~ 30146557 (+) True G5198
TU6352 lncRNA upstream 131189 30122095 ~ 30123181 (+) True G5191
TU6346 lncRNA upstream 145330 30108841 ~ 30109040 (+) True G5185
TU6294 lncRNA upstream 555146 29697667 ~ 29699224 (+) True G5141
TU6278 lncRNA upstream 568827 29684227 ~ 29685543 (+) True G5129
TU6434 lncRNA downstream 19973 30275108 ~ 30276282 (+) True G5248
TU6440 lncRNA downstream 41732 30296867 ~ 30307175 (+) True AMCG00004039
TU6458 lncRNA downstream 290152 30545287 ~ 30545525 (+) True G5271
TU6459 lncRNA downstream 297842 30552977 ~ 30553214 (+) True G5272
TU6489 lncRNA downstream 485429 30740564 ~ 30740873 (+) True G5291
AMCG00004030 mRNA upstream 24743 30226633 ~ 30229627 (+) True AMCG00004030
AMCG00004029 mRNA upstream 51580 30201188 ~ 30202790 (+) True AMCG00004029
AMCG00004025 mRNA upstream 86498 30157362 ~ 30167872 (+) True AMCG00004025
AMCG00004026 mRNA upstream 116426 30131236 ~ 30137944 (+) True AMCG00004026
AMCG00004024 mRNA upstream 139401 30111086 ~ 30114969 (+) True AMCG00004024
AMCG00004028 mRNA downstream 3337 30258472 ~ 30270198 (+) True AMCG00004028
AMCG00004039 mRNA downstream 48256 30303391 ~ 30307144 (+) False AMCG00004039
AMCG00004045 mRNA downstream 450005 30705140 ~ 30722327 (+) True AMCG00004045
AMCG00004050 mRNA downstream 526919 30782054 ~ 30802209 (+) True AMCG00004050
AMCG00004049 mRNA downstream 549956 30805091 ~ 30807233 (+) True AMCG00004049
TU5898 other upstream 2151159 28062363 ~ 28103211 (+) True G4831
TU5899 other upstream 2186584 28062674 ~ 28067786 (+) False G4831
TU5497 other upstream 4458579 25794052 ~ 25795791 (+) False AMCG00003930
TU5311 other upstream 5570450 24683400 ~ 24683920 (+) True G4360
TU5028 other upstream 6541236 23710238 ~ 23713134 (+) False AMCG00003898
TU6431 other downstream 16075 30271210 ~ 30271524 (+) True G5245
TU6554 other downstream 632860 30887995 ~ 30894827 (+) True AMCG00004056
TU6919 other downstream 2874985 33130120 ~ 33131186 (+) True G5642
TU7209 other downstream 4597728 34852863 ~ 34870320 (+) True AMCG00004138
TU7437 other downstream 5497398 35752533 ~ 35766180 (+) True AMCG00004158

Expression Profile