Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00004079 |
| length | 276 |
| RNA type | mRNA |
| GC content | 0.61 |
| exon number | 2 |
| gene id | AMCG00004079 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 32400405 ~ 32402383 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0046835 | carbohydrate phosphorylation | biological_process |
| GO:0006014 | D-ribose metabolic process | biological_process |
| GO:0004747 | ribokinase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU6773 | lncRNA | upstream | 13011 | 32384435 ~ 32387535 (+) | True | G5529 |
| TU6771 | lncRNA | upstream | 16867 | 32383409 ~ 32383679 (+) | True | G5527 |
| TU6760 | lncRNA | upstream | 50443 | 32348390 ~ 32350103 (+) | True | G5522 |
| TU6735 | lncRNA | upstream | 90634 | 32309505 ~ 32309912 (+) | True | G5501 |
| TU6733 | lncRNA | upstream | 131475 | 32268748 ~ 32269071 (+) | True | G5499 |
| TU6819 | lncRNA | downstream | 209495 | 32611833 ~ 32612051 (+) | True | G5569 |
| TU6947 | lncRNA | downstream | 1035990 | 33438328 ~ 33445420 (+) | True | G5662 |
| TU6968 | lncRNA | downstream | 1070698 | 33473036 ~ 33473330 (+) | True | G5680 |
| TU6969 | lncRNA | downstream | 1072504 | 33474842 ~ 33475047 (+) | True | G5681 |
| TU6976 | lncRNA | downstream | 1163835 | 33566173 ~ 33567479 (+) | True | G5688 |
| AMCG00004075 | mRNA | upstream | 53951 | 32335392 ~ 32346595 (+) | True | AMCG00004075 |
| AMCG00004078 | mRNA | upstream | 71374 | 32305491 ~ 32329172 (+) | True | AMCG00004078 |
| AMCG00004071 | mRNA | upstream | 1029388 | 31370382 ~ 31371158 (+) | True | AMCG00004071 |
| AMCG00004066 | mRNA | upstream | 1337837 | 31047145 ~ 31062709 (+) | True | AMCG00004066 |
| AMCG00004067 | mRNA | upstream | 1360809 | 31030418 ~ 31039737 (+) | True | AMCG00004067 |
| AMCG00004080 | mRNA | downstream | 26121 | 32428459 ~ 32428913 (+) | True | AMCG00004080 |
| AMCG00004083 | mRNA | downstream | 47069 | 32449407 ~ 32455846 (+) | True | AMCG00004083 |
| AMCG00004081 | mRNA | downstream | 97135 | 32499473 ~ 32529839 (+) | True | AMCG00004081 |
| AMCG00004082 | mRNA | downstream | 156641 | 32558979 ~ 32559365 (+) | True | AMCG00004082 |
| AMCG00004086 | mRNA | downstream | 169241 | 32571579 ~ 32582699 (+) | True | AMCG00004086 |
| TU6554 | other | upstream | 1505719 | 30887995 ~ 30894827 (+) | True | AMCG00004056 |
| TU6431 | other | upstream | 2129022 | 30271210 ~ 30271524 (+) | True | G5245 |
| TU5898 | other | upstream | 4297335 | 28062363 ~ 28103211 (+) | True | G4831 |
| TU5899 | other | upstream | 4332760 | 28062674 ~ 28067786 (+) | False | G4831 |
| TU5497 | other | upstream | 6604755 | 25794052 ~ 25795791 (+) | False | AMCG00003930 |
| TU6919 | other | downstream | 727782 | 33130120 ~ 33131186 (+) | True | G5642 |
| TU7209 | other | downstream | 2450525 | 34852863 ~ 34870320 (+) | True | AMCG00004138 |
| TU7437 | other | downstream | 3350195 | 35752533 ~ 35766180 (+) | True | AMCG00004158 |
| TU7524 | other | downstream | 3869854 | 36272192 ~ 36274930 (+) | False | AMCG00004167 |
| TU7741 | other | downstream | 4371663 | 36774001 ~ 36774523 (+) | True | G6314 |
