Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00004113 |
| length | 591 |
| RNA type | mRNA |
| GC content | 0.64 |
| exon number | 1 |
| gene id | AMCG00004113 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 33767046 ~ 33767636 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0007264 | small GTPase mediated signal transduction | biological_process |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0005525 | GTP binding | molecular_function |
| id | description |
|---|---|
| K07856 | RHOB; Ras homolog gene family, member B |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU7014 | lncRNA | upstream | 139539 | 33626367 ~ 33627507 (+) | True | G5720 |
| TU6999 | lncRNA | upstream | 167035 | 33597892 ~ 33600011 (+) | True | G5707 |
| TU6976 | lncRNA | upstream | 199567 | 33566173 ~ 33567479 (+) | True | G5688 |
| TU6969 | lncRNA | upstream | 291999 | 33474842 ~ 33475047 (+) | True | G5681 |
| TU6968 | lncRNA | upstream | 293716 | 33473036 ~ 33473330 (+) | True | G5680 |
| TU7059 | lncRNA | downstream | 1953 | 33769589 ~ 33771848 (+) | True | G5750 |
| TU7098 | lncRNA | downstream | 124838 | 33892474 ~ 33893143 (+) | True | G5768 |
| TU7121 | lncRNA | downstream | 310715 | 34078351 ~ 34080785 (+) | True | G5787 |
| TU7123 | lncRNA | downstream | 314190 | 34081826 ~ 34090122 (+) | True | G5788 |
| TU7144 | lncRNA | downstream | 524635 | 34292271 ~ 34292501 (+) | True | G5804 |
| AMCG00004110 | mRNA | upstream | 5589 | 33747909 ~ 33761457 (+) | True | AMCG00004110 |
| AMCG00004109 | mRNA | upstream | 201183 | 33561024 ~ 33565863 (+) | True | AMCG00004109 |
| AMCG00004108 | mRNA | upstream | 314374 | 33435750 ~ 33452672 (+) | True | AMCG00004108 |
| AMCG00004100 | mRNA | upstream | 519482 | 33241032 ~ 33247564 (+) | True | AMCG00004100 |
| AMCG00004101 | mRNA | upstream | 624508 | 33137636 ~ 33142538 (+) | True | AMCG00004101 |
| AMCG00004115 | mRNA | downstream | 137655 | 33905291 ~ 33912885 (+) | True | AMCG00004115 |
| AMCG00004121 | mRNA | downstream | 351935 | 34119571 ~ 34130023 (+) | True | AMCG00004121 |
| AMCG00004122 | mRNA | downstream | 363490 | 34131126 ~ 34133612 (+) | True | AMCG00004122 |
| AMCG00004125 | mRNA | downstream | 863585 | 34631221 ~ 34638669 (+) | True | AMCG00004125 |
| AMCG00004124 | mRNA | downstream | 898756 | 34666392 ~ 34685790 (+) | True | AMCG00004124 |
| TU6919 | other | upstream | 635860 | 33130120 ~ 33131186 (+) | True | G5642 |
| TU6554 | other | upstream | 2872219 | 30887995 ~ 30894827 (+) | True | AMCG00004056 |
| TU6431 | other | upstream | 3495522 | 30271210 ~ 30271524 (+) | True | G5245 |
| TU5898 | other | upstream | 5663835 | 28062363 ~ 28103211 (+) | True | G4831 |
| TU7209 | other | downstream | 1085227 | 34852863 ~ 34870320 (+) | True | AMCG00004138 |
| TU7437 | other | downstream | 1984897 | 35752533 ~ 35766180 (+) | True | AMCG00004158 |
| TU7524 | other | downstream | 2504556 | 36272192 ~ 36274930 (+) | False | AMCG00004167 |
| TU7741 | other | downstream | 3006365 | 36774001 ~ 36774523 (+) | True | G6314 |
| TU7756 | other | downstream | 3093911 | 36861547 ~ 36891746 (+) | True | G6328 |
