RNA id: AMCG00004187



Basic Information


Item Value
RNA id AMCG00004187
length 474
RNA type mRNA
GC content 0.51
exon number 6
gene id AMCG00004187
representative True

Chromosome Information


Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 36790434 ~ 36873869 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAGtgAGCAGAGTATTTGTCAAGCCCGGGCCGCTGTCATGGTGTATGACGATGCCAATAAGAAATGGGTGCCAGCAGGCGGTTCGACTGGGTTCAGCAGAGTCCACATCTACCATCACACAGGGAGCAATGCATTCCGAGTGGTGGGCCGCAAAATCCAGGACCATCAGGTGGTAATAAACTGCGCCATTCCCAAGGGCCTGAAATACAACCAGGCCACACAGACCTTCCACCAATGGCGTGATGCCCGTCAGGTGTACGGCTTGAACTTCGGAAGCAAGGAGGATGCCAATGTTTTTGCCAGTGCCATGATGCATGCCTTGGAAGTATTAAACTCTCAAGATACAGctgacAGTTTTTTAAAGCTTCACCAAAGGCCCCACATTGCCAAGACCAACCCCTCAGCTGTCCCCTCAGGTTCAGAATGGACCGTCGCAGGAGGAGGTGGAGATCCAGAGAAGcatatatattaa

Function


GO: NA

KEGG:

id description
K05746 ENAH, MENA; enabled

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU7748 lncRNA upstream 8204 36782012 ~ 36782230 (+) True G6321
TU7747 lncRNA upstream 9017 36780561 ~ 36781417 (+) True G6320
TU7746 lncRNA upstream 11284 36778880 ~ 36779150 (+) True G6319
TU7745 lncRNA upstream 11857 36778368 ~ 36778577 (+) True G6318
TU7744 lncRNA upstream 12269 36777934 ~ 36778165 (+) True G6317
TU7820 lncRNA downstream 154170 37028039 ~ 37028246 (+) True G6383
TU7844 lncRNA downstream 284307 37158176 ~ 37265504 (+) True G6405
TU7861 lncRNA downstream 441776 37315645 ~ 37318146 (+) True G6421
TU7870 lncRNA downstream 463657 37337526 ~ 37341014 (+) True G6427
TU7873 lncRNA downstream 470192 37344061 ~ 37344445 (+) True G6428
AMCG00004186 mRNA upstream 25228 36748856 ~ 36765206 (+) True AMCG00004186
AMCG00004180 mRNA upstream 44369 36742627 ~ 36746065 (+) True AMCG00004180
AMCG00004179 mRNA upstream 100150 36689380 ~ 36690284 (+) False AMCG00004179
AMCG00004176 mRNA upstream 120786 36663802 ~ 36669648 (+) True AMCG00004176
AMCG00004174 mRNA upstream 288318 36501826 ~ 36502116 (+) True AMCG00004174
AMCG00004192 mRNA downstream 10489 36884358 ~ 36904094 (+) True AMCG00004192
AMCG00004191 mRNA downstream 38777 36912646 ~ 36918990 (+) True AMCG00004191
AMCG00004190 mRNA downstream 63035 36936904 ~ 36939547 (+) True AMCG00004190
AMCG00004193 mRNA downstream 325054 37198923 ~ 37231208 (+) True AMCG00004193
AMCG00004197 mRNA downstream 520233 37394102 ~ 37417947 (+) True AMCG00004197
TU7741 other upstream 15911 36774001 ~ 36774523 (+) True G6314
TU7524 other upstream 515504 36272192 ~ 36274930 (+) False AMCG00004167
TU7437 other upstream 1024254 35752533 ~ 35766180 (+) True AMCG00004158
TU7209 other upstream 1920114 34852863 ~ 34870320 (+) True AMCG00004138
TU6919 other upstream 3659248 33130120 ~ 33131186 (+) True G5642
TU7800 other downstream 125488 36999357 ~ 37000158 (+) True G6369
TU8679 other downstream 4585707 41459576 ~ 41507231 (+) True G7094
TU8899 other downstream 5338641 42212510 ~ 42216362 (+) False AMCG00004304
TU9000 other downstream 5814910 42688779 ~ 42691109 (+) True G7329
TU9559 other downstream 9088141 45962010 ~ 45968306 (+) True AMCG00004380

Expression Profile