RNA id: AMCG00004206



Basic Information


Item Value
RNA id AMCG00004206
length 308
RNA type mRNA
GC content 0.42
exon number 3
gene id AMCG00004206
representative True

Chromosome Information


Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 37476289 ~ 37478687 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TTTCAACAATCGCATATTATGCAGAGCTCATCATGGAAGGGGGGGCAGCTTCAAACATCACCAGTTTCTTGAGTTCACTGAATTTCCCAATAGTCTTGGACAGCGGGATGAGTCTAAGTTCACTTAATGTCACAACAGATTGCATAATAAATGGAAATCAAACGAACTGCAGCTGTCACGATGGTTACATTTGGAGTGGTGCTGTATGTGAAACCTACCCCATGTGCTGCAACAACATTTACTGCATTGTGGGAACAAATGAATCTACACCTATGTGTCTGGCAAAGGAAAGGGaTGAAAAAGGTTTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU7873 lncRNA upstream 131844 37344061 ~ 37344445 (+) True G6428
TU7870 lncRNA upstream 135275 37337526 ~ 37341014 (+) True G6427
TU7861 lncRNA upstream 158143 37315645 ~ 37318146 (+) True G6421
TU7844 lncRNA upstream 210785 37158176 ~ 37265504 (+) True G6405
TU7820 lncRNA upstream 448043 37028039 ~ 37028246 (+) True G6383
TU7929 lncRNA downstream 36195 37514882 ~ 37516498 (+) True G6471
TU7999 lncRNA downstream 365822 37844509 ~ 37847720 (+) True AMCG00004210
TU8059 lncRNA downstream 776542 38255229 ~ 38255483 (+) True G6573
TU8071 lncRNA downstream 937911 38416598 ~ 38418776 (+) True G6585
TU8073 lncRNA downstream 987709 38466396 ~ 38466643 (+) True G6586
AMCG00004199 mRNA upstream 31002 37427449 ~ 37445287 (+) True AMCG00004199
AMCG00004197 mRNA upstream 58342 37394102 ~ 37417947 (+) True AMCG00004197
AMCG00004193 mRNA upstream 245081 37198923 ~ 37231208 (+) True AMCG00004193
AMCG00004190 mRNA upstream 536742 36936904 ~ 36939547 (+) True AMCG00004190
AMCG00004191 mRNA upstream 557299 36912646 ~ 36918990 (+) True AMCG00004191
AMCG00004205 mRNA downstream 143 37478830 ~ 37485632 (+) True AMCG00004205
AMCG00004198 mRNA downstream 51075 37529762 ~ 37545788 (+) True AMCG00004198
AMCG00004209 mRNA downstream 88646 37567333 ~ 37570266 (+) True AMCG00004209
AMCG00004208 mRNA downstream 92116 37570803 ~ 37607222 (+) True AMCG00004208
AMCG00004210 mRNA downstream 353936 37832623 ~ 37846771 (+) False AMCG00004210
TU7800 other upstream 476131 36999357 ~ 37000158 (+) True G6369
TU7756 other upstream 584543 36861547 ~ 36891746 (+) True G6328
TU7741 other upstream 701766 36774001 ~ 36774523 (+) True G6314
TU7524 other upstream 1201359 36272192 ~ 36274930 (+) False AMCG00004167
TU7437 other upstream 1710109 35752533 ~ 35766180 (+) True AMCG00004158
TU8679 other downstream 3980889 41459576 ~ 41507231 (+) True G7094
TU8899 other downstream 4733823 42212510 ~ 42216362 (+) False AMCG00004304
TU9000 other downstream 5210092 42688779 ~ 42691109 (+) True G7329
TU9559 other downstream 8483323 45962010 ~ 45968306 (+) True AMCG00004380
TU9841 other downstream 10668201 48146888 ~ 48147156 (+) True G7999

Expression Profile