Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00004216 |
| length | 516 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 3 |
| gene id | AMCG00004216 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 38213382 ~ 38220095 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | biological_process |
| GO:0009790 | embryo development | biological_process |
| id | description |
|---|---|
| K20473 | NBAS; neuroblastoma-amplified sequence |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU7999 | lncRNA | upstream | 365662 | 37844509 ~ 37847720 (+) | True | AMCG00004210 |
| TU7929 | lncRNA | upstream | 696884 | 37514882 ~ 37516498 (+) | True | G6471 |
| TU7873 | lncRNA | upstream | 868937 | 37344061 ~ 37344445 (+) | True | G6428 |
| TU7870 | lncRNA | upstream | 872368 | 37337526 ~ 37341014 (+) | True | G6427 |
| TU7861 | lncRNA | upstream | 895236 | 37315645 ~ 37318146 (+) | True | G6421 |
| TU8059 | lncRNA | downstream | 35134 | 38255229 ~ 38255483 (+) | True | G6573 |
| TU8071 | lncRNA | downstream | 196503 | 38416598 ~ 38418776 (+) | True | G6585 |
| TU8073 | lncRNA | downstream | 246301 | 38466396 ~ 38466643 (+) | True | G6586 |
| TU8085 | lncRNA | downstream | 396149 | 38616244 ~ 38616464 (+) | True | G6598 |
| TU8105 | lncRNA | downstream | 529819 | 38749914 ~ 38756252 (+) | True | G6617 |
| AMCG00004215 | mRNA | upstream | 27245 | 38088863 ~ 38186137 (+) | True | AMCG00004215 |
| AMCG00004210 | mRNA | upstream | 366611 | 37832623 ~ 37846771 (+) | False | AMCG00004210 |
| AMCG00004208 | mRNA | upstream | 606160 | 37570803 ~ 37607222 (+) | True | AMCG00004208 |
| AMCG00004209 | mRNA | upstream | 643116 | 37567333 ~ 37570266 (+) | True | AMCG00004209 |
| AMCG00004198 | mRNA | upstream | 667594 | 37529762 ~ 37545788 (+) | True | AMCG00004198 |
| AMCG00004214 | mRNA | downstream | 5461 | 38225556 ~ 38226811 (+) | True | AMCG00004214 |
| AMCG00004218 | mRNA | downstream | 511413 | 38731508 ~ 38743566 (+) | True | AMCG00004218 |
| AMCG00004222 | mRNA | downstream | 605726 | 38825821 ~ 38833968 (+) | True | AMCG00004222 |
| AMCG00004223 | mRNA | downstream | 619921 | 38840016 ~ 38850011 (+) | True | AMCG00004223 |
| AMCG00004224 | mRNA | downstream | 630694 | 38850789 ~ 38855317 (+) | True | AMCG00004224 |
| TU7800 | other | upstream | 1213224 | 36999357 ~ 37000158 (+) | True | G6369 |
| TU7756 | other | upstream | 1321636 | 36861547 ~ 36891746 (+) | True | G6328 |
| TU7741 | other | upstream | 1438859 | 36774001 ~ 36774523 (+) | True | G6314 |
| TU7524 | other | upstream | 1938452 | 36272192 ~ 36274930 (+) | False | AMCG00004167 |
| TU7437 | other | upstream | 2447202 | 35752533 ~ 35766180 (+) | True | AMCG00004158 |
| TU8679 | other | downstream | 3239481 | 41459576 ~ 41507231 (+) | True | G7094 |
| TU8899 | other | downstream | 3992415 | 42212510 ~ 42216362 (+) | False | AMCG00004304 |
| TU9000 | other | downstream | 4468684 | 42688779 ~ 42691109 (+) | True | G7329 |
| TU9559 | other | downstream | 7741915 | 45962010 ~ 45968306 (+) | True | AMCG00004380 |
| TU9841 | other | downstream | 9926793 | 48146888 ~ 48147156 (+) | True | G7999 |
