RNA id: AMCG00004229



Basic Information


Item Value
RNA id AMCG00004229
length 279
RNA type mRNA
GC content 0.50
exon number 2
gene id AMCG00004229
representative True

Chromosome Information


Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 39302709 ~ 39312703 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCTGTTTATCAGCACCGCACTGGTGACTCATGCGTTTGAAAAGCTGTGCGCCCCAGGACTGCAAAGCGAGCTTGACCAGGAGTACCAAGACAAATTCAGAAGACTTCCAGTGGAGATCCAGGAGTTCGTGCAGGAGGCAACCAAAGGGAACGGAGACCACTGTACCGTCTCTTTTTCCATGGCTTCTGACAGTGGAAAACTCAACCACAAGACCCACCAATCTGAGGAGGATATAGAAGAGGAAAGCCCAGAAAAAGTCTTTGACACACCACTCTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU8179 lncRNA upstream 154415 39122547 ~ 39148294 (+) True G6684
TU8180 lncRNA upstream 154415 39122678 ~ 39148294 (+) False G6684
TU8170 lncRNA upstream 335819 38966678 ~ 38966890 (+) True G6676
TU8160 lncRNA upstream 375679 38926738 ~ 38927030 (+) True G6667
TU8146 lncRNA upstream 443704 38858118 ~ 38859005 (+) True G6653
TU8288 lncRNA downstream 455681 39768384 ~ 39768607 (+) True G6769
TU8290 lncRNA downstream 457762 39770465 ~ 39770698 (+) True G6771
TU8339 lncRNA downstream 631797 39944500 ~ 39945055 (+) True G6807
TU8358 lncRNA downstream 702564 40015267 ~ 40034323 (+) False G6819
TU8359 lncRNA downstream 702564 40015267 ~ 40034323 (+) False G6819
AMCG00004228 mRNA upstream 9476 39249462 ~ 39293233 (+) True AMCG00004228
AMCG00004225 mRNA upstream 339074 38954137 ~ 38963635 (+) True AMCG00004225
AMCG00004224 mRNA upstream 447392 38850789 ~ 38855317 (+) True AMCG00004224
AMCG00004223 mRNA upstream 452698 38840016 ~ 38850011 (+) True AMCG00004223
AMCG00004222 mRNA upstream 468741 38825821 ~ 38833968 (+) True AMCG00004222
AMCG00004230 mRNA downstream 84800 39397503 ~ 39436248 (+) True AMCG00004230
AMCG00004233 mRNA downstream 128423 39441126 ~ 39442709 (+) True AMCG00004233
AMCG00004231 mRNA downstream 132496 39445199 ~ 39453488 (+) True AMCG00004231
AMCG00004240 mRNA downstream 246789 39559492 ~ 39559927 (+) True AMCG00004240
AMCG00004235 mRNA downstream 280240 39592943 ~ 39598254 (+) True AMCG00004235
TU7800 other upstream 2302551 36999357 ~ 37000158 (+) True G6369
TU7756 other upstream 2410963 36861547 ~ 36891746 (+) True G6328
TU7741 other upstream 2528186 36774001 ~ 36774523 (+) True G6314
TU7524 other upstream 3027779 36272192 ~ 36274930 (+) False AMCG00004167
TU7437 other upstream 3536529 35752533 ~ 35766180 (+) True AMCG00004158
TU8679 other downstream 2146873 41459576 ~ 41507231 (+) True G7094
TU8899 other downstream 2899807 42212510 ~ 42216362 (+) False AMCG00004304
TU9000 other downstream 3376076 42688779 ~ 42691109 (+) True G7329
TU9559 other downstream 6649307 45962010 ~ 45968306 (+) True AMCG00004380
TU9841 other downstream 8834185 48146888 ~ 48147156 (+) True G7999

Expression Profile