RNA id: AMCG00004239



Basic Information


Item Value
RNA id AMCG00004239
length 195
RNA type mRNA
GC content 0.39
exon number 2
gene id AMCG00004239
representative True

Chromosome Information


Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 39657951 ~ 39662597 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ACGAAAACTGGAATAGCCCTACTGTATAATGAAGAGACGGGTAATACTTATGACATTCGGCTAAAGCTAACAAAGGAAGTATTAACCATACAGAAACAGGATGTTGTGTGCGTCAACGTTGGTGAAACCTATCCAAATGGCGGTGCTGAGCATAAAGTGCCTGTGGTCATATCAAAGATTTTTAAAGATCAAGTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU8276 lncRNA downstream 61312 39594941 ~ 39596639 (-) True G6762
TU8161 lncRNA downstream 730929 38926721 ~ 38927022 (-) True G6668
TU8086 lncRNA downstream 1041486 38616219 ~ 38616465 (-) True G6599
TU8075 lncRNA downstream 1191287 38466413 ~ 38466664 (-) True G6588
TU8060 lncRNA downstream 1402580 38255009 ~ 38255371 (-) True G6574
TU8289 lncRNA upstream 105812 39768409 ~ 39768610 (-) True G6770
TU8321 lncRNA upstream 176571 39839168 ~ 39841082 (-) True G6793
TU8357 lncRNA upstream 347814 40010411 ~ 40014259 (-) True G6818
TU8363 lncRNA upstream 352637 40015234 ~ 40034323 (-) False G6822
TU8364 lncRNA upstream 357582 40020179 ~ 40034323 (-) True G6822
AMCG00004237 mRNA downstream 12773 39601527 ~ 39645178 (-) True AMCG00004237
AMCG00004238 mRNA downstream 79982 39564916 ~ 39577969 (-) True AMCG00004238
AMCG00004234 mRNA downstream 178871 39457144 ~ 39479080 (-) True AMCG00004234
AMCG00004232 mRNA downstream 512691 39125700 ~ 39145260 (-) True AMCG00004232
AMCG00004227 mRNA downstream 539278 39103590 ~ 39118673 (-) True AMCG00004227
AMCG00004241 mRNA upstream 195891 39858488 ~ 39867709 (-) True AMCG00004241
AMCG00004244 mRNA upstream 210464 39873061 ~ 39881929 (-) True AMCG00004244
AMCG00004243 mRNA upstream 243672 39906269 ~ 39911511 (-) True AMCG00004243
AMCG00004242 mRNA upstream 271720 39934317 ~ 39942767 (-) True AMCG00004242
AMCG00004247 mRNA upstream 288095 39950692 ~ 39951933 (-) True AMCG00004247
TU7893 other downstream 2289129 37367985 ~ 37368822 (-) True G6441
TU7345 other downstream 4243505 35354621 ~ 35414446 (-) False AMCG00004143
TU7292 other downstream 4694112 34960960 ~ 34963839 (-) False AMCG00004132
TU7224 other downstream 4765338 34891901 ~ 34892613 (-) True G5871
TU7138 other downstream 5522351 34132098 ~ 34135600 (-) True G5801
TU8320 other upstream 179338 39841935 ~ 39849123 (-) True G6792
TU8946 other upstream 2714129 42376726 ~ 42379406 (-) True AMCG00004313
TU9361 other upstream 4858317 44520914 ~ 44522213 (-) True G7608
TU9683 other upstream 6644329 46306926 ~ 46307319 (-) True G7868
TU9698 other upstream 6805528 46468125 ~ 46468434 (-) True G7882

Expression Profile