Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00004278 |
| length | 627 |
| RNA type | mRNA |
| GC content | 0.59 |
| exon number | 2 |
| gene id | AMCG00004278 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 40938585 ~ 40940764 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0097458 | obsolete neuron part | cellular_component |
| GO:0001917 | photoreceptor inner segment | cellular_component |
| id | description |
|---|---|
| ko04744 | Phototransduction |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU8456 | lncRNA | upstream | 597377 | 40339067 ~ 40341208 (+) | False | AMCG00004257 |
| TU8401 | lncRNA | upstream | 739623 | 40148962 ~ 40198962 (+) | True | G6850 |
| TU8398 | lncRNA | upstream | 824634 | 40110200 ~ 40113951 (+) | True | G6847 |
| TU8391 | lncRNA | upstream | 849671 | 40088608 ~ 40088914 (+) | True | G6840 |
| TU8360 | lncRNA | upstream | 904262 | 40020076 ~ 40034323 (+) | True | G6819 |
| TU8623 | lncRNA | downstream | 37235 | 40977999 ~ 40978319 (+) | True | G7048 |
| TU8658 | lncRNA | downstream | 354534 | 41295298 ~ 41364066 (+) | True | G7078 |
| TU8666 | lncRNA | downstream | 426381 | 41367145 ~ 41368478 (+) | True | G7084 |
| TU8687 | lncRNA | downstream | 582289 | 41523053 ~ 41529308 (+) | True | G7102 |
| TU8686 | lncRNA | downstream | 664346 | 41605110 ~ 41606759 (+) | True | G7101 |
| AMCG00004276 | mRNA | upstream | 17111 | 40906392 ~ 40921474 (+) | True | AMCG00004276 |
| AMCG00004277 | mRNA | upstream | 33852 | 40897450 ~ 40904733 (+) | True | AMCG00004277 |
| AMCG00004267 | mRNA | upstream | 76820 | 40851231 ~ 40861765 (+) | True | AMCG00004267 |
| AMCG00004268 | mRNA | upstream | 113604 | 40811386 ~ 40824981 (+) | True | AMCG00004268 |
| AMCG00004266 | mRNA | upstream | 208781 | 40722163 ~ 40729804 (+) | True | AMCG00004266 |
| AMCG00004280 | mRNA | downstream | 59883 | 41000647 ~ 41011758 (+) | True | AMCG00004280 |
| AMCG00004286 | mRNA | downstream | 436104 | 41376868 ~ 41387623 (+) | True | AMCG00004286 |
| AMCG00004289 | mRNA | downstream | 524183 | 41464947 ~ 41517390 (+) | True | AMCG00004289 |
| AMCG00004291 | mRNA | downstream | 602312 | 41543076 ~ 41550969 (+) | True | AMCG00004291 |
| AMCG00004292 | mRNA | downstream | 627645 | 41568409 ~ 41600974 (+) | True | AMCG00004292 |
| TU7800 | other | upstream | 3938427 | 36999357 ~ 37000158 (+) | True | G6369 |
| TU7756 | other | upstream | 4046839 | 36861547 ~ 36891746 (+) | True | G6328 |
| TU7741 | other | upstream | 4164062 | 36774001 ~ 36774523 (+) | True | G6314 |
| TU7524 | other | upstream | 4663655 | 36272192 ~ 36274930 (+) | False | AMCG00004167 |
| TU7437 | other | upstream | 5172405 | 35752533 ~ 35766180 (+) | True | AMCG00004158 |
| TU8679 | other | downstream | 518812 | 41459576 ~ 41507231 (+) | True | G7094 |
| TU8899 | other | downstream | 1271746 | 42212510 ~ 42216362 (+) | False | AMCG00004304 |
| TU9000 | other | downstream | 1748015 | 42688779 ~ 42691109 (+) | True | G7329 |
| TU9559 | other | downstream | 5021246 | 45962010 ~ 45968306 (+) | True | AMCG00004380 |
| TU9841 | other | downstream | 7206124 | 48146888 ~ 48147156 (+) | True | G7999 |
