RNA id: AMCG00004313


Basic Information

Item Value
RNA id AMCG00004313
length 537
RNA type mRNA
GC content 0.53
exon number 8
gene id AMCG00004313
representative False

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 42376726 ~ 42531006 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAATGATGTGAGAGGCTGTGTGGACTACGTGTTTATCCCGAGCTATTATGCCCTGTATGATCAATGTCCCACTCTgTATGCAGTCTGGCTGGTCCTCTGGCTCGCATGGAATGTGTTTGTAATCTGCTTCTACTTGGAGGTTGGGGACCTTTCTAAGGACACAGACCTCATAATGACATTTAACATATCCATGCACCGCTCCTGGTGGATGGAGAATGGGCCTGGGTGCAAGGTGACCCCggtgacccccccacccccctgggCTCCAGAGGATCACCGATACATCAGCATCTCCGGCTGCTTGTTGGAGTATCAGTACATAGAGGTGGCTCACAGTTCTCTGCAGATTGTCCTAGCATTCACCCACTGTGCTTCTCCCAATGCCACTCTGGACTGCTGTCCCGCTGCCACTGAGCAGAAGGGGCCGGTGCGCCAGCTGGCTGGCTTTATCTACGCCTGCTACGTTGTGAAAGTCATTACGGAGGAAGAAGACAGCTGTCAAAaaCGGGTGCTCAGTGTCATCATCAGTGACTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU8916 lncRNA downstream 64680 42312919 ~ 42313118 (-) True G7270
TU8914 lncRNA downstream 112821 42264690 ~ 42264977 (-) True G7268
TU8905 lncRNA downstream 157614 42219958 ~ 42220184 (-) True G7259
TU8884 lncRNA downstream 288171 42087804 ~ 42089627 (-) True G7243
TU8863 lncRNA downstream 310134 42066598 ~ 42067664 (-) True AMCG00004302
TU9007 lncRNA upstream 161748 42692754 ~ 42719691 (-) True G7335
TU9010 lncRNA upstream 194906 42725912 ~ 42737850 (-) True G7336
TU9118 lncRNA upstream 704812 43235818 ~ 43237610 (-) True G7419
TU9175 lncRNA upstream 871947 43402953 ~ 43428586 (-) True AMCG00004336
TU9174 lncRNA upstream 888845 43419851 ~ 43428586 (-) False AMCG00004336
AMCG00004312 mRNA downstream 10863 42364767 ~ 42366935 (-) True AMCG00004312
AMCG00004311 mRNA downstream 15810 42355551 ~ 42361988 (-) True AMCG00004311
AMCG00004310 mRNA downstream 41186 42333224 ~ 42336612 (-) True AMCG00004310
AMCG00004307 mRNA downstream 227623 42118653 ~ 42150175 (-) True AMCG00004307
AMCG00004306 mRNA downstream 269199 42101689 ~ 42108599 (-) True AMCG00004306
AMCG00004316 mRNA upstream 109403 42640409 ~ 42660607 (-) True AMCG00004316
AMCG00004317 mRNA upstream 148318 42679324 ~ 42687565 (-) True AMCG00004317
AMCG00004320 mRNA upstream 158042 42689048 ~ 42691079 (-) True AMCG00004320
AMCG00004319 mRNA upstream 207497 42738503 ~ 42752817 (-) True AMCG00004319
AMCG00004323 mRNA upstream 370029 42901035 ~ 42901883 (-) True AMCG00004323
TU8320 other downstream 2528675 39841935 ~ 39849123 (-) True G6792
TU7893 other downstream 5008976 37367985 ~ 37368822 (-) True G6441
TU7345 other downstream 6963352 35354621 ~ 35414446 (-) False AMCG00004143
TU7292 other downstream 7413959 34960960 ~ 34963839 (-) False AMCG00004132
TU7224 other downstream 7485185 34891901 ~ 34892613 (-) True G5871
TU9361 other upstream 1989908 44520914 ~ 44522213 (-) True G7608
TU9683 other upstream 3775920 46306926 ~ 46307319 (-) True G7868
TU9698 other upstream 3937119 46468125 ~ 46468434 (-) True G7882
TU9761 other upstream 4353629 46884635 ~ 46887337 (-) False AMCG00004398
TU9801 other upstream 4528890 47059896 ~ 47306589 (-) False AMCG00004403

Expression Profile