RNA id: AMCG00004363


Basic Information

Item Value
RNA id AMCG00004363
length 1227
RNA type mRNA
GC content 0.56
exon number 10
gene id AMCG00004363
representative True

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 44645284 ~ 44651272 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTGGCTCCTCCTGCTGGTCCTAAAGTTCATGCTGCTGCTGACCCGCAGCTATGGCCTGTTGGACTGCCAGTCCCACCCAACCTTCCGACAGCCAGTCAACTCTGACATCACAATGATGTGTGGCACTGAGAAGATGGAGCTGTGCATCCTGCTGTGCCCGATCTACTTCGCTGGCTACAATGAATCACTGATGGCTCTCAACAATCGCCATGACAACAACGAATGCCACGGCACCCCTGATTGGTCTGTGGACCCGCCCACCCTGAAGTTCAATTTCTCCATCAGTGAAAGTGCCGTTTCCATCTGCAACAACAATCTGAAGATCACTCAGGAGGTGGGCTCAGGCCTATTCTCTGACTTCTCCAGTGTTCAGTCTATCAATATCTCGGGGACGATTAACTCTCTGGACCCCAACGCCGGCACCATCACCTACAGTCAGGAGATGATGTACATGTACTCCTGCCGCTACCCCCTGCAGTACCTCATCAACAACACCCAGATGGGCGTGTCAGGGGTGAGCATAGCAGTGAAGGACAACAATGGCAGCTTCATCAGCACTCTGAGCATGCACCTGTTTGAGGACCGTTTCTACATACAGAAGCTGGTGGTCCCTGAGTCTGGGCTACAGCTGAAGAAAAGGATCTTTGTACAGGTCAAGGCCACGAACCTGACAGAAAGGTTCCACGTGCTCCTGGACCGATGCTACGCCACcacctctccctttccctcggCCAGCTCCTACTACGACCTCTTCGTGGGGTGCACGCGCGACGGCCAGACAGTCATTGAAATCAACGGAGATAATCAGACCGCGAAGTTCTCCTTCGAGGCATTCCGCTTCGTGGAGCACAAGAATATGACCGTGTCCACCTTCTACCTGCACTGCGCCACACGGCTCTGCGAGAGGTCCACCTGCCAAAGCCTCCGCCCGAACTGCACTAATGGGGCGCGCCGACGCAGGGAGGTGCAGCTGGAGAACCATTCCTCAGTCAGTGACCCCACCACGGTCAGCTCCGGGCCCATTACCACCAAGGTGGATAACGCTGTTGCACCGCTACCATCTCCAAAAggcCCAGTCGCATCAATGTCCAACGGCTCTCTGATTGGTGTGGGCGTGGCTGTAGGTCTGATGGGTGTGGTCTGCGTGTCTCTGATCCTCTTCATCTTCCTGCGCATGCGCCTGGGCCTGGCACACGGGACACAGAAGGACAGCGCCGGGAAATGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU9460 lncRNA downstream 12002 44632752 ~ 44633282 (-) True G7684
TU9388 lncRNA downstream 94962 44549382 ~ 44550322 (-) False AMCG00004364
TU9363 lncRNA downstream 124466 44520175 ~ 44520818 (-) True G7609
TU9329 lncRNA downstream 236619 44408360 ~ 44408665 (-) True G7587
TU9327 lncRNA downstream 308714 44336271 ~ 44336570 (-) True G7585
TU9455 lncRNA upstream 57015 44708287 ~ 44709624 (-) False AMCG00004372
TU9488 lncRNA upstream 146234 44797506 ~ 44879219 (-) True G7704
TU9499 lncRNA upstream 487870 45139142 ~ 45143452 (-) True G7714
TU9534 lncRNA upstream 1166726 45817998 ~ 45852813 (-) True G7744
TU9625 lncRNA upstream 1536234 46187506 ~ 46189689 (-) True G7820
AMCG00004360 mRNA downstream 27885 44606289 ~ 44617399 (-) True AMCG00004360
AMCG00004358 mRNA downstream 40975 44591677 ~ 44604309 (-) True AMCG00004358
AMCG00004362 mRNA downstream 59175 44576544 ~ 44586109 (-) True AMCG00004362
AMCG00004365 mRNA downstream 76724 44561668 ~ 44568560 (-) True AMCG00004365
AMCG00004364 mRNA downstream 83709 44540163 ~ 44561575 (-) True AMCG00004364
AMCG00004359 mRNA upstream 5970 44657242 ~ 44668196 (-) True AMCG00004359
AMCG00004369 mRNA upstream 24553 44675825 ~ 44680666 (-) True AMCG00004369
AMCG00004371 mRNA upstream 33300 44684572 ~ 44692353 (-) True AMCG00004371
AMCG00004372 mRNA upstream 57624 44708896 ~ 44711270 (-) False AMCG00004372
AMCG00004370 mRNA upstream 87398 44738670 ~ 44740860 (-) True AMCG00004370
TU9361 other downstream 123071 44520914 ~ 44522213 (-) True G7608
TU8946 other downstream 2265878 42376726 ~ 42379406 (-) True AMCG00004313
TU8320 other downstream 4796161 39841935 ~ 39849123 (-) True G6792
TU7893 other downstream 7276462 37367985 ~ 37368822 (-) True G6441
TU7345 other downstream 9230838 35354621 ~ 35414446 (-) False AMCG00004143
TU9683 other upstream 1655654 46306926 ~ 46307319 (-) True G7868
TU9698 other upstream 1816853 46468125 ~ 46468434 (-) True G7882
TU9761 other upstream 2233363 46884635 ~ 46887337 (-) False AMCG00004398
TU9801 other upstream 2408624 47059896 ~ 47306589 (-) False AMCG00004403
TU10259 other upstream 5297589 49948861 ~ 49949592 (-) True G8310

Expression Profile