RNA id: AMCG00004372


Basic Information

Item Value
RNA id AMCG00004372
length 462
RNA type mRNA
GC content 0.51
exon number 3
gene id AMCG00004372
representative False

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 44623190 ~ 44712051 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTCACTCACCTGGTTCTTGTCCAGCCAGCCAATGACCTCATTGCACTTGTCCAGGATCTTCTGTTTGTCCTCGTCACTGATCTTTCCCTTCAGCTTCTCATCCTCCACTGTGGACTTCATGTTGAAGGCTGCTCTTGTCAGCAGCGGAGACATTCATGATGCCGTTGGCATCAATGTCGAATGTGACCTCAATCTGAGGAACGCCACGGGGAGCCGGGGGGATGCCGCTGATTACTATAACCAACAACCAGAGGAACTGACTCACCTTGCCCAGGTAGGCCTCTGCAATTTCCTTCATCTTGACCAGGACCATGGAGGAAATCTCCTCAGGGTAGAAAGACTTGGACTCGCCCTTATACTCGACCTGGACCTTGGGACGGGTGGAATCGTTGATGACATTGAATGGCCAGTGCTTCATGTCCGATTGTACCACCGCATCATCAAACCTGCGACCAATTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU9460 lncRNA downstream 75614 44632752 ~ 44633282 (-) True G7684
TU9388 lncRNA downstream 158574 44549382 ~ 44550322 (-) False AMCG00004364
TU9363 lncRNA downstream 188078 44520175 ~ 44520818 (-) True G7609
TU9329 lncRNA downstream 300231 44408360 ~ 44408665 (-) True G7587
TU9327 lncRNA downstream 372326 44336271 ~ 44336570 (-) True G7585
TU9488 lncRNA upstream 86236 44797506 ~ 44879219 (-) True G7704
TU9499 lncRNA upstream 427872 45139142 ~ 45143452 (-) True G7714
TU9534 lncRNA upstream 1106728 45817998 ~ 45852813 (-) True G7744
TU9625 lncRNA upstream 1476236 46187506 ~ 46189689 (-) True G7820
TU9624 lncRNA upstream 1476720 46187990 ~ 46189689 (-) False G7820
AMCG00004371 mRNA downstream 16543 44684572 ~ 44692353 (-) True AMCG00004371
AMCG00004369 mRNA downstream 28230 44675825 ~ 44680666 (-) True AMCG00004369
AMCG00004359 mRNA downstream 40700 44657242 ~ 44668196 (-) True AMCG00004359
AMCG00004363 mRNA downstream 57624 44645284 ~ 44651272 (-) True AMCG00004363
AMCG00004360 mRNA downstream 91497 44606289 ~ 44617399 (-) True AMCG00004360
AMCG00004370 mRNA upstream 27400 44738670 ~ 44740860 (-) True AMCG00004370
AMCG00004373 mRNA upstream 35440 44746710 ~ 44804158 (-) True AMCG00004373
AMCG00004376 mRNA upstream 464062 45175332 ~ 45187413 (-) True AMCG00004376
AMCG00004377 mRNA upstream 557914 45269184 ~ 45272999 (-) True AMCG00004377
AMCG00004381 mRNA upstream 1150025 45861295 ~ 45867466 (-) True AMCG00004381
TU9361 other downstream 186683 44520914 ~ 44522213 (-) True G7608
TU8946 other downstream 2329490 42376726 ~ 42379406 (-) True AMCG00004313
TU8320 other downstream 4859773 39841935 ~ 39849123 (-) True G6792
TU7893 other downstream 7340074 37367985 ~ 37368822 (-) True G6441
TU7345 other downstream 9294450 35354621 ~ 35414446 (-) False AMCG00004143
TU9683 other upstream 1595656 46306926 ~ 46307319 (-) True G7868
TU9698 other upstream 1756855 46468125 ~ 46468434 (-) True G7882
TU9761 other upstream 2173365 46884635 ~ 46887337 (-) False AMCG00004398
TU9801 other upstream 2348626 47059896 ~ 47306589 (-) False AMCG00004403
TU10259 other upstream 5237591 49948861 ~ 49949592 (-) True G8310

Expression Profile