RNA id: AMCG00004583


Basic Information

Item Value
RNA id AMCG00004583
length 439
RNA type mRNA
GC content 0.53
exon number 3
gene id AMCG00004583
representative True

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 54223803 ~ 54226053 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AAGCCCGGTCACTGTCAGTAGTGGCGATGAAAGTAAGCGGTTTCAAAGTGCTGGGTTTACAATCCCCTGGTTAATTATGGCCTTCACACCAGAGACAGTCTTGCACTACAGCTATGAGCAAACTCAACTTTGTATTCATTACGATGACTAATTTAACAGCTGCTTGTATCGAAAGACATCCGCAGAGGAGCGGAACAGATTGGACGGAGACCGACCAAGGATGGAGCATGAGGAGATTAATGTTGACGAGGTCGCCTCCCTCTTCCTAGCTGTtggtcggtcggtcggtcggtcggtcggtcaGTCGGGTCCTggcttgctctctctcctggctGCACCCCGGAGTAATGGCCTGCTCTGCGTCAGCCTGTTTGAGGAAAGGCTTCCAGACCTCCGATACGTGTCTCTGTGCTTGGCAGTTGTGCAGCGGCTGGCCTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU11462 lncRNA downstream 17790 54205553 ~ 54206013 (-) True G9261
TU11415 lncRNA downstream 136765 54086575 ~ 54087038 (-) True G9217
TU11347 lncRNA downstream 358128 53864951 ~ 53865675 (-) True G9161
TU11321 lncRNA downstream 360434 53796770 ~ 53863369 (-) False AMCG00004567
TU11477 lncRNA upstream 32510 54258563 ~ 54273287 (-) True G9273
TU11586 lncRNA upstream 216328 54442381 ~ 54450341 (-) False AMCG00004598
TU11684 lncRNA upstream 422998 54649051 ~ 54676988 (-) True G9427
TU11688 lncRNA upstream 451611 54677664 ~ 54677917 (-) True G9431
TU11705 lncRNA upstream 467293 54693346 ~ 54789735 (-) True G9445
AMCG00004582 mRNA downstream 3935 54206080 ~ 54219868 (-) True AMCG00004582
AMCG00004581 mRNA downstream 18808 54195348 ~ 54204995 (-) True AMCG00004581
AMCG00004579 mRNA downstream 101316 54105061 ~ 54122487 (-) True AMCG00004579
AMCG00004575 mRNA downstream 180375 54032634 ~ 54043428 (-) True AMCG00004575
AMCG00004574 mRNA downstream 219253 53992451 ~ 54004550 (-) True AMCG00004574
AMCG00004589 mRNA upstream 105195 54331248 ~ 54342566 (-) True AMCG00004589
AMCG00004591 mRNA upstream 128954 54355007 ~ 54356449 (-) True AMCG00004591
AMCG00004590 mRNA upstream 130407 54356460 ~ 54373627 (-) True AMCG00004590
AMCG00004592 mRNA upstream 147646 54373699 ~ 54373947 (-) True AMCG00004592
AMCG00004599 mRNA upstream 168422 54394475 ~ 54398918 (-) True AMCG00004599
TU11409 other downstream 188281 54033464 ~ 54035522 (-) False AMCG00004575
TU11324 other downstream 367238 53686416 ~ 53856565 (-) False AMCG00004567
TU11319 other downstream 401581 53686416 ~ 53822222 (-) False AMCG00004567
TU11317 other downstream 533804 53686416 ~ 53689999 (-) False AMCG00004567
TU11148 other downstream 1035782 53185226 ~ 53188021 (-) False AMCG00004551
TU11562 other upstream 134045 54360098 ~ 54364267 (-) False AMCG00004590
TU11664 other upstream 350587 54576640 ~ 54583230 (-) True G9414
TU11665 other upstream 350587 54576640 ~ 54620055 (-) False G9414
TU11901 other upstream 1141532 55367585 ~ 55420058 (-) True G9604
TU11906 other upstream 1156163 55382216 ~ 55388939 (-) False G9608

Expression Profile