RNA id: TU12437


Basic Information

Item Value
RNA id TU12437
length 448
RNA type TUCP
GC content 0.43
exon number 3
gene id AMCG00004675
representative False

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 56450789 ~ 56484848 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

tctctctctctcttttttcagGCTTGCCCCAatctctttgtgtgtttgagtgagtgtgaaagagagagagagagagagagagaaaaaaaaaaagagggggagAGGTAGAGTTAGAGGTATAGAGCTAGGAgtcacagggaaaaaaaaacacgttttcCCGGATTGGATAAATAATTATTCTCCGTGATATAAGAAGAATATCATTCGAGGAAATTGGCTTTCTCACCCACGGGAGGAGAACACACCAGACCGGCTGACGTGATGTCAGGGACCGACGATGAGGGACAGGACTATGGAAGTTTGGACGACCGGGCCGTTTTACCAGACAATGAAGAGGACCTGGAGGAGGAACTATCGGAAGGCGATGCCCCCaaggtgaagaagaagaagaaagcaaagaagagccGAGAGAGCAAGACGGGCAAGCGAGCCAGACTGAGGAGAGAGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU12528 lncRNA downstream 8914 56470522 ~ 56471426 (-) True G10067
TU12521 lncRNA downstream 125934 56353928 ~ 56354406 (-) True G10061
TU12522 lncRNA downstream 125934 56353928 ~ 56354406 (-) False G10061
TU12516 lncRNA downstream 128200 56346873 ~ 56352140 (-) False AMCG00004672
TU12488 lncRNA downstream 349782 56129442 ~ 56130558 (-) True G10034
TU12530 lncRNA upstream 4720 56489568 ~ 56491763 (-) True G10068
TU12535 lncRNA upstream 30653 56515501 ~ 56516414 (-) True G10073
TU12554 lncRNA upstream 43768 56528616 ~ 56733600 (-) True G10082
TU12568 lncRNA upstream 121573 56606421 ~ 56647806 (-) True G10093
TU12542 lncRNA upstream 180211 56665059 ~ 56752935 (-) True AMCG00004685
AMCG00004676 mRNA downstream 37384 56424588 ~ 56442956 (-) True AMCG00004676
AMCG00004678 mRNA downstream 57434 56417056 ~ 56422906 (-) True AMCG00004678
AMCG00004677 mRNA downstream 65916 56410985 ~ 56414424 (-) True AMCG00004677
AMCG00004674 mRNA downstream 71049 56401461 ~ 56409291 (-) True AMCG00004674
AMCG00004672 mRNA downstream 95470 56283994 ~ 56384870 (-) True AMCG00004672
AMCG00004682 mRNA upstream 9808 56494656 ~ 56511693 (-) True AMCG00004682
AMCG00004684 mRNA upstream 168334 56653182 ~ 56655085 (-) True AMCG00004684
AMCG00004685 mRNA upstream 182081 56666929 ~ 56672648 (-) False AMCG00004685
AMCG00004692 mRNA upstream 201439 56686287 ~ 56690184 (-) False AMCG00004692
AMCG00004690 mRNA upstream 205969 56690817 ~ 56691706 (-) False AMCG00004690
TU12067 other downstream 644163 55822149 ~ 55836177 (-) False AMCG00004653
TU11944 other downstream 929115 55529663 ~ 55551225 (-) False AMCG00004640
TU11941 other downstream 936787 55529663 ~ 55543553 (-) False AMCG00004640
TU11901 other downstream 1060282 55367585 ~ 55420058 (-) True G9604
TU11906 other downstream 1091401 55382216 ~ 55388939 (-) False G9608
TU12544 other upstream 128179 56613027 ~ 56694612 (-) False AMCG00004685
TU12583 other upstream 200889 56685737 ~ 56690492 (-) True AMCG00004692
TU12597 other upstream 262943 56747791 ~ 56750963 (-) True G10115
TU12548 other upstream 287654 56772502 ~ 56775440 (-) True G10079
TU12607 other upstream 292278 56777126 ~ 56778469 (-) True G10121

Expression Profile