RNA id: AMCG00004705


Basic Information

Item Value
RNA id AMCG00004705
length 1137
RNA type mRNA
GC content 0.61
exon number 7
gene id AMCG00004705
representative True

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 57037487 ~ 57050034 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGGCGTGTCCATCTTCTACAGGCAGTGCCCACAGACCACTCGCAACTTGGCTGTGTTCCCGGACACGCCCTCGGGGGCGGAGCCGGCGGCCCTGGTGCCAGTAGGCGGGACCTGCGTGGCTCACAGCCAATCGCAGCCTGGCGCCCCGCCCAAACTACACTGCAACGCAGAAGGCGATTGGATGGTGGCAGTGGGGGGATGTGTCTcgtgTCCAGTTGGTCAGTATAAGTCATCCGTGGGCTTGATCCCTTGCTCCCCGTGTCCAGCACACAGCCGGTCAGTGACCACGGGCTCCAGGCTGTGCGAGTGTGACAGTGGCTACTACAGAGCGCCCTCTGACCCCGAAATCAGTGCCTGCACAGGTTGTAGGACTACATTACCCACAAGCCCCTACTCTGCCTACTGTGTGTTATTGGCCCCTCCCTCTGCCCCGCTCTCTCTGTCCTGGGAGTACGAGGGCTCAGGTGTGGTTCTGCGTTGGCGACCGCCCTCGGACAGTGGGGGCCGGGGGGACGTGTGGTATGCGGTGCAGTGCCGCgtctgcccccccgcccccccagctGTGTGCGTGCGCTGCGGCGACTCGATCTCCTACAGCCCCGCCCCCTCGCCCCTGACCGCCACCCGTGTCACACTGGGCAACCTGCTCACCAGGGTCACCTACATCATTCAGCCTGAGAGACCAAACGGAGAAATCATGGAGTATCAGATCCGCTACTACgacaagAGTTCAGATGAAGACAGCGCAGTTTCAGTGCTCAGTCAGACCAACATGGCCATAGTGGGGGGTCTGTCTCCAGGCTCCATCTACGCCTTCCAGATCCGCGCCAGGAACGCCCGCGGCTATGGCCCCTATAGTGGCACTGCGTACTTCACCACACTGGGGCAAGGGCTGGTTGGCTGGTCTGCAGGCTgctgtccaagctctttgcTCAGGTTCTTCACTTCACTGAGCGAGGCTCTCTTCTTCATCTCCTGTCTCAGTCTTCAGCTCTCCTTTCAGCTGCTCTCTATCCTGCTGCAGCTCCTGTACACTCGCCCTGTGCTCATTCCTGAGCTGCACCAGCTCATCTCTCATCTGATGCTcgctcccctcctccctccggCTGCTCATTGTCAGTTCCCTGAACTCTGA

Function

GO:

id name namespace
GO:0009987 cellular process biological_process
GO:0016301 kinase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU12652 lncRNA downstream 8572 57025537 ~ 57028915 (-) False G10157
TU12555 lncRNA downstream 17680 57019295 ~ 57019807 (-) False G10082
TU12556 lncRNA downstream 142868 56683137 ~ 56894619 (-) True G10083
TU12628 lncRNA downstream 175844 56860337 ~ 56861643 (-) True G10135
TU12557 lncRNA downstream 216701 56762045 ~ 56820786 (-) True G10084
AMCG00004708 mRNA downstream 54871 56975119 ~ 56982616 (-) True AMCG00004708
AMCG00004706 mRNA downstream 80992 56933397 ~ 56956495 (-) True AMCG00004706
AMCG00004704 mRNA downstream 127220 56897603 ~ 56910267 (-) True AMCG00004704
AMCG00004697 mRNA downstream 178881 56856356 ~ 56858606 (-) True AMCG00004697
AMCG00004699 mRNA downstream 184441 56846683 ~ 56853046 (-) True AMCG00004699
TU12651 other downstream 9158 57025537 ~ 57028329 (-) True G10157
TU12609 other downstream 245326 56788752 ~ 56792161 (-) True G10123
TU12607 other downstream 259018 56777126 ~ 56778469 (-) True G10121
TU12548 other downstream 262047 56772502 ~ 56775440 (-) True G10079
TU12597 other downstream 286524 56747791 ~ 56750963 (-) True G10115

Expression Profile


Homologous

species RNA id representative length rna type GC content exon number chromosome id location
zebrafish (Danio rerio) TCONS_00020612 True 3518 mRNA 0.53 19 NC_007127.7 12335274 ~ 12470034 (-)