RNA id: TU10015


Basic Information

Item Value
RNA id TU10015
length 205
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G8133
representative True

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 49101708 ~ 49101912 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

caatgcactagttagagctcatctggatactgtgtacagttctgagctccacacttcaagaaagatatcgctgctctagaggcagttcagaggagagcaaccagacttattccaggtctgaagggaaagtcctactcagagagactgagggaactgaaccttttcaccctggaacagaggagactacgtggggacttgatccaag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU9998 lncRNA downstream 53635 48977624 ~ 49048073 (-) True G8118
TU10000 lncRNA downstream 143345 48956794 ~ 48958363 (-) False AMCG00004420
TU9993 lncRNA downstream 145245 48955376 ~ 48956463 (-) True G8116
TU9987 lncRNA downstream 152812 48946066 ~ 48948896 (-) True AMCG00004420
TU9989 lncRNA downstream 154811 48946066 ~ 48946897 (-) False AMCG00004420
TU10066 lncRNA upstream 320732 49422644 ~ 49425182 (-) True AMCG00004429
TU10228 lncRNA upstream 709466 49811378 ~ 49814054 (-) True G8281
TU10233 lncRNA upstream 742670 49844582 ~ 49858455 (-) True G8286
TU10256 lncRNA upstream 842386 49944298 ~ 49945808 (-) True G8307
TU10257 lncRNA upstream 845971 49947883 ~ 49948531 (-) True G8308
AMCG00004420 mRNA downstream 116397 48940024 ~ 48985311 (-) False AMCG00004420
AMCG00004419 mRNA downstream 167292 48932465 ~ 48934416 (-) True AMCG00004419
AMCG00004417 mRNA downstream 171144 48910997 ~ 48930564 (-) True AMCG00004417
AMCG00004418 mRNA downstream 206707 48889077 ~ 48895001 (-) True AMCG00004418
AMCG00004413 mRNA downstream 517307 48583139 ~ 48584401 (-) True AMCG00004413
AMCG00004423 mRNA upstream 148324 49250236 ~ 49259701 (-) True AMCG00004423
AMCG00004429 mRNA upstream 309295 49411207 ~ 49424986 (-) False AMCG00004429
AMCG00004432 mRNA upstream 336045 49437957 ~ 49439719 (-) True AMCG00004432
AMCG00004433 mRNA upstream 348916 49450828 ~ 49461400 (-) True AMCG00004433
AMCG00004435 mRNA upstream 480211 49582123 ~ 49588829 (-) True AMCG00004435
TU9801 other downstream 1795119 47059896 ~ 47306589 (-) False AMCG00004403
TU9761 other downstream 2214371 46884635 ~ 46887337 (-) False AMCG00004398
TU9698 other downstream 2633274 46468125 ~ 46468434 (-) True G7882
TU9683 other downstream 2794389 46306926 ~ 46307319 (-) True G7868
TU9361 other downstream 4579495 44520914 ~ 44522213 (-) True G7608
TU10259 other upstream 846949 49948861 ~ 49949592 (-) True G8310
TU10293 other upstream 903220 50005132 ~ 50008694 (-) True G8340
TU10487 other upstream 1569154 50671066 ~ 50673375 (-) True G8501
TU10541 other upstream 1621955 50723867 ~ 50725353 (-) True G8542
TU10795 other upstream 2851752 51953664 ~ 51954532 (-) True AMCG00004505

Expression Profile