RNA id: TU10300


Basic Information

Item Value
RNA id TU10300
length 201
lncRNA type inter_gene
GC content 0.56
exon number 1
gene id G8347
representative True

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 50019824 ~ 50020024 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GCCCCTGATGACGGCCATGTGGACGTTCTTCAGTGAGCCATCGTCGTCCTCGAAAACCTCTGCGGACCACAGCGCACAGTTCACGTGTGTCCACTCATTCTGACCGATGTACAGCAGTCTCCCACCATCCTGGACAAACACGGGGACAGGTTtcaagagacagacagaacacACCGGACCCAGTGCACTGTTCAGTGTCAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU10299 lncRNA downstream 4039 50015539 ~ 50015785 (-) True G8346
TU10298 lncRNA downstream 5072 50014390 ~ 50014752 (-) True G8345
TU10296 lncRNA downstream 6443 50013144 ~ 50013381 (-) True G8343
TU10295 lncRNA downstream 8403 50010916 ~ 50011421 (-) True G8342
TU10294 lncRNA downstream 9809 50009780 ~ 50010015 (-) True G8341
TU10303 lncRNA upstream 13372 50033396 ~ 50038355 (-) True G8350
TU10314 lncRNA upstream 46374 50066398 ~ 50069172 (-) False AMCG00004457
TU10312 lncRNA upstream 46460 50066484 ~ 50070801 (-) True AMCG00004457
TU10333 lncRNA upstream 107748 50127772 ~ 50135731 (-) True G8370
TU10376 lncRNA upstream 192168 50212192 ~ 50214639 (-) False AMCG00004467
AMCG00004447 mRNA downstream 178304 49839535 ~ 49841520 (-) True AMCG00004447
AMCG00004445 mRNA downstream 186084 49831199 ~ 49833740 (-) True AMCG00004445
AMCG00004446 mRNA downstream 196914 49820555 ~ 49822910 (-) True AMCG00004446
AMCG00004444 mRNA downstream 223640 49775924 ~ 49796184 (-) True AMCG00004444
AMCG00004440 mRNA downstream 247546 49768277 ~ 49772278 (-) True AMCG00004440
AMCG00004456 mRNA upstream 22235 50042259 ~ 50048074 (-) True AMCG00004456
AMCG00004457 mRNA upstream 50511 50070535 ~ 50071941 (-) False AMCG00004457
AMCG00004460 mRNA upstream 124686 50144710 ~ 50157745 (-) True AMCG00004460
AMCG00004461 mRNA upstream 150052 50170076 ~ 50182056 (-) True AMCG00004461
AMCG00004465 mRNA upstream 168668 50188692 ~ 50197647 (-) True AMCG00004465
TU10293 other downstream 11130 50005132 ~ 50008694 (-) True G8340
TU10259 other downstream 70232 49948861 ~ 49949592 (-) True G8310
TU9801 other downstream 2713235 47059896 ~ 47306589 (-) False AMCG00004403
TU9761 other downstream 3132487 46884635 ~ 46887337 (-) False AMCG00004398
TU9698 other downstream 3551390 46468125 ~ 46468434 (-) True G7882
TU10487 other upstream 651042 50671066 ~ 50673375 (-) True G8501
TU10541 other upstream 703843 50723867 ~ 50725353 (-) True G8542
TU10795 other upstream 1933640 51953664 ~ 51954532 (-) True AMCG00004505
TU10834 other upstream 2045502 52065526 ~ 52065882 (-) True G8760
TU10836 other upstream 2048029 52068053 ~ 52071586 (-) True G8761

Expression Profile