RNA id: TU10834


Basic Information

Item Value
RNA id TU10834
length 357
RNA type TUCP
GC content 0.48
exon number 1
gene id G8760
representative True

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 52065526 ~ 52065882 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CGTCTTACTGGGATCCGGAGCGCCCCCATGAAGCTGATGGCTTCGGGCTCTTCCCCGCTGGGCTCCGGCATGACCGTGCCGTTCACCGGACCGTGGGACGGGCTGCCAAAAATCTCCTCTGTGTTACAGCAGTCCTGGAGAAGAGGCTCCTGTTCAGGATTCTCCTGGACAAACACACACGGAGACAAGGGCGCCGTTAGGGTGGTCTCAGCCGGTGCCTGGAGGATAGGATTTGGGGGGAGAGAATTAAAGAAGGCTTTGAGGCTGAATATCTTAAGTAAGGGAATTTGCAGCATTAGAGATCGTATTTATAGATGTACGTACATGGTGCTGAGGGGGACTGCAGTCCACGTCTTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU10833 lncRNA downstream 76 52063404 ~ 52065450 (-) True G8759
TU10832 lncRNA downstream 6025 52058736 ~ 52059501 (-) True G8758
TU10745 lncRNA downstream 185370 51846912 ~ 51880156 (-) True G8707
TU10621 lncRNA downstream 1054383 51010818 ~ 51011143 (-) True G8601
TU10563 lncRNA downstream 1308800 50755393 ~ 50756726 (-) True G8552
TU10840 lncRNA upstream 24987 52090869 ~ 52091247 (-) True G8765
TU10845 lncRNA upstream 50998 52116880 ~ 52163082 (-) True G8769
TU10852 lncRNA upstream 102458 52168340 ~ 52168541 (-) True G8776
TU10876 lncRNA upstream 137312 52203194 ~ 52203680 (-) True G8795
TU10916 lncRNA upstream 303357 52369239 ~ 52369463 (-) True G8829
AMCG00004505 mRNA downstream 111186 51942693 ~ 51954340 (-) False AMCG00004505
AMCG00004502 mRNA downstream 146627 51870043 ~ 51918899 (-) True AMCG00004502
AMCG00004503 mRNA downstream 196988 51856858 ~ 51868538 (-) True AMCG00004503
AMCG00004497 mRNA downstream 233187 51817211 ~ 51832339 (-) True AMCG00004497
AMCG00004493 mRNA downstream 537931 51520856 ~ 51527595 (-) True AMCG00004493
AMCG00004517 mRNA upstream 146748 52212630 ~ 52222193 (-) True AMCG00004517
AMCG00004519 mRNA upstream 161738 52227620 ~ 52232504 (-) True AMCG00004519
AMCG00004518 mRNA upstream 171332 52237214 ~ 52240865 (-) True AMCG00004518
AMCG00004521 mRNA upstream 188961 52254843 ~ 52296244 (-) True AMCG00004521
AMCG00004522 mRNA upstream 251749 52317631 ~ 52336606 (-) True AMCG00004522
TU10795 other downstream 110994 51953664 ~ 51954532 (-) True AMCG00004505
TU10541 other downstream 1340173 50723867 ~ 50725353 (-) True G8542
TU10487 other downstream 1392151 50671066 ~ 50673375 (-) True G8501
TU10293 other downstream 2056832 50005132 ~ 50008694 (-) True G8340
TU10259 other downstream 2115934 49948861 ~ 49949592 (-) True G8310
TU10836 other upstream 2171 52068053 ~ 52071586 (-) True G8761
TU11033 other upstream 793160 52859042 ~ 52874108 (-) False AMCG00004529
TU11034 other upstream 793160 52859042 ~ 52860438 (-) False AMCG00004529
TU11035 other upstream 793160 52859042 ~ 52871546 (-) False AMCG00004529
TU11026 other upstream 833678 52899560 ~ 52911752 (-) False AMCG00004533

Expression Profile