RNA id: TU1141


Basic Information

Item Value
RNA id TU1141
length 303
lncRNA type inter_gene
GC content 0.27
exon number 1
gene id G961
representative True

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 5829447 ~ 5829749 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ccccccaacctctcctcacaggtgttccacaaggctccgtcctgggcccgctcctgttctctctctacacttgctccctgggccccctcatcgcttcccatggtttctcctaccacttctacgctgatgatgcccagatcttcctgtcttttccctcttctgaccctctcatcccctcacgcatctcttcctgcttgtctgccatttccgcctggatgcactcgcaccacctcaagctcaacctctccaaatcagatctcctctttttcccccactcttcctcaccttctgttgacctcccca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1126 lncRNA downstream 41126 5788068 ~ 5788321 (-) True G946
TU1122 lncRNA downstream 73979 5752077 ~ 5755468 (-) True G942
TU1029 lncRNA downstream 487460 5340461 ~ 5341987 (-) True G862
TU1009 lncRNA downstream 494689 5330726 ~ 5334758 (-) True G845
TU1008 lncRNA downstream 499673 5329572 ~ 5329774 (-) True G844
TU1169 lncRNA upstream 125355 5955104 ~ 5955319 (-) True G982
TU1180 lncRNA upstream 156816 5986565 ~ 5986975 (-) True G993
TU1185 lncRNA upstream 457579 6287328 ~ 6287540 (-) True G998
TU1319 lncRNA upstream 988908 6818657 ~ 6825716 (-) True G1114
TU1323 lncRNA upstream 1012020 6841769 ~ 6851759 (-) True G1117
AMCG00003489 mRNA downstream 96010 5633462 ~ 5733437 (-) True AMCG00003489
AMCG00003488 mRNA downstream 273705 5553481 ~ 5555742 (-) True AMCG00003488
AMCG00003486 mRNA downstream 415786 5408798 ~ 5413661 (-) True AMCG00003486
AMCG00003483 mRNA downstream 456029 5361087 ~ 5373418 (-) True AMCG00003483
AMCG00003482 mRNA downstream 471397 5357586 ~ 5358050 (-) True AMCG00003482
AMCG00003490 mRNA upstream 17149 5846898 ~ 5851181 (-) True AMCG00003490
AMCG00003491 mRNA upstream 84898 5914647 ~ 5969984 (-) True AMCG00003491
AMCG00003492 mRNA upstream 145196 5974945 ~ 5977627 (-) True AMCG00003492
AMCG00003493 mRNA upstream 158335 5988084 ~ 5997463 (-) True AMCG00003493
AMCG00003494 mRNA upstream 313323 6143072 ~ 6144359 (-) True AMCG00003494
TU1027 other downstream 472979 5345839 ~ 5356468 (-) True AMCG00003484
TU920 other downstream 1168080 4650771 ~ 4661367 (-) False AMCG00003476
TU643 other downstream 2399175 3394657 ~ 3430272 (-) True G531
TU462 other downstream 3390626 2437727 ~ 2438821 (-) False AMCG00003422
TU426 other downstream 3427552 2397642 ~ 2401895 (-) True AMCG00003423
TU2164 other upstream 5121427 10951176 ~ 10956335 (-) False AMCG00003586
TU2225 other upstream 5273577 11103326 ~ 11104672 (-) False AMCG00003595
TU2480 other upstream 6094059 11923808 ~ 11939783 (-) True AMCG00003623
TU2508 other upstream 6246289 12076038 ~ 12078152 (-) False AMCG00003625
TU2704 other upstream 7205204 13034953 ~ 13035489 (-) True G2236

Expression Profile