RNA id: TU11804


Basic Information

Item Value
RNA id TU11804
length 200
lncRNA type inter_gene
GC content 0.54
exon number 1
gene id G9517
representative True

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 55019897 ~ 55020096 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATTCTATGTGTCCCTGTCTGCCCCTCTCTCCGTCTCACTGTCTGTCCCCTCCACATGTCCCccattctccctccctctgtcccctTCATCGATCTCTGCTCCTCTCTTTCCCCGTCCTCTacctctctgtgtccctctctctgtctctgagaTGCTGTCTCCACCTCTCCATATAAATGTGCAGCATTGCTGGATTGTTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU11776 lncRNA downstream 11099 55007762 ~ 55008798 (-) True G9504
TU11787 lncRNA downstream 16094 55001583 ~ 55003803 (-) False G9512
TU11799 lncRNA downstream 16094 55001583 ~ 55003803 (-) True G9512
TU11771 lncRNA downstream 44900 54923529 ~ 54974997 (-) False G9502
TU11810 lncRNA upstream 53950 55074046 ~ 55074375 (-) True G9523
TU11821 lncRNA upstream 94246 55114342 ~ 55116494 (-) True G9533
TU11822 lncRNA upstream 94246 55114342 ~ 55114911 (-) False G9533
TU11867 lncRNA upstream 242829 55262925 ~ 55263287 (-) True G9570
TU11890 lncRNA upstream 326687 55346783 ~ 55357633 (-) True G9593
AMCG00004621 mRNA downstream 1797 55009704 ~ 55018100 (-) True AMCG00004621
AMCG00004622 mRNA downstream 21469 54977847 ~ 54998428 (-) True AMCG00004622
AMCG00004618 mRNA downstream 99959 54915584 ~ 54919938 (-) True AMCG00004618
AMCG00004607 mRNA downstream 311886 54699816 ~ 54708011 (-) True AMCG00004607
AMCG00004605 mRNA downstream 413070 54601459 ~ 54606827 (-) True AMCG00004605
AMCG00004620 mRNA upstream 10164 55030260 ~ 55035952 (-) True AMCG00004620
AMCG00004625 mRNA upstream 96541 55116637 ~ 55136087 (-) True AMCG00004625
AMCG00004627 mRNA upstream 120809 55140905 ~ 55141489 (-) True AMCG00004627
AMCG00004628 mRNA upstream 184989 55205085 ~ 55219718 (-) True AMCG00004628
AMCG00004633 mRNA upstream 204739 55224835 ~ 55270161 (-) True AMCG00004633
TU11665 other downstream 399842 54576640 ~ 54620055 (-) False G9414
TU11664 other downstream 436667 54576640 ~ 54583230 (-) True G9414
TU11562 other downstream 655630 54360098 ~ 54364267 (-) False AMCG00004590
TU11409 other downstream 984375 54033464 ~ 54035522 (-) False AMCG00004575
TU11324 other downstream 1163332 53686416 ~ 53856565 (-) False AMCG00004567
TU11901 other upstream 347489 55367585 ~ 55420058 (-) True G9604
TU11906 other upstream 362120 55382216 ~ 55388939 (-) False G9608
TU11941 other upstream 509567 55529663 ~ 55543553 (-) False AMCG00004640
TU11944 other upstream 509567 55529663 ~ 55551225 (-) False AMCG00004640
TU12067 other upstream 802053 55822149 ~ 55836177 (-) False AMCG00004653

Expression Profile