RNA id: TU2776



Basic Information


Item Value
RNA id TU2776
length 235
lncRNA type read_through
GC content 0.54
exon number 3
gene id G2291
representative True

Chromosome Information


Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 13233495 ~ 13236993 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ACCCTTTTGACTTATCTAAGAAGAAAATTGGGCCTGACAGGAACCAAGCTGGGCTGTGCTGAGGGAGGGTGCGGCGCTTGCACAGTGATGGTCTCCACGTTCCATCCCCATATGAACAAGATCATTCACTACTCTGTAAACGCCTGCCTGGCTCCAATTTGTTCCCTGCACCACTGCGCTGTCACCACTGTGGAGGGGATTGGCAGCGTCACCACCAAGCTGCATCCTGTTCAGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2772 lncRNA downstream 55323 13172632 ~ 13178172 (-) False G2287
TU2771 lncRNA downstream 55323 13177460 ~ 13178172 (-) True G2287
TU2769 lncRNA downstream 89967 13131620 ~ 13143528 (-) True G2285
TU2744 lncRNA downstream 132177 13100512 ~ 13101318 (-) True G2266
TU2732 lncRNA downstream 151551 13071796 ~ 13081944 (-) False AMCG00003652
TU2820 lncRNA upstream 177868 13414861 ~ 13415156 (-) True G2324
TU2833 lncRNA upstream 270899 13507892 ~ 13508930 (-) True G2337
TU2847 lncRNA upstream 492454 13729447 ~ 13732039 (-) False AMCG00003667
TU2957 lncRNA upstream 1172243 14409236 ~ 14410253 (-) True G2443
TU2958 lncRNA upstream 1178386 14415379 ~ 14415673 (-) True G2444
AMCG00003662 mRNA downstream 21315 13117366 ~ 13212180 (-) True AMCG00003662
AMCG00003652 mRNA downstream 116835 13080192 ~ 13116660 (-) True AMCG00003652
AMCG00003651 mRNA downstream 167941 13055994 ~ 13065554 (-) True AMCG00003651
AMCG00003650 mRNA downstream 183103 13037692 ~ 13050392 (-) True AMCG00003650
AMCG00003645 mRNA downstream 265339 12926695 ~ 12968156 (-) True AMCG00003645
AMCG00003658 mRNA upstream 14105 13251098 ~ 13270245 (-) True AMCG00003658
AMCG00003657 mRNA upstream 44458 13281451 ~ 13283514 (-) True AMCG00003657
AMCG00003659 mRNA upstream 53306 13290299 ~ 13316898 (-) True AMCG00003659
AMCG00003663 mRNA upstream 150814 13387807 ~ 13398847 (-) True AMCG00003663
AMCG00003664 mRNA upstream 272798 13509791 ~ 13514900 (-) True AMCG00003664
TU2747 other downstream 122367 13104356 ~ 13111128 (-) False AMCG00003652
TU2704 other downstream 198006 13034953 ~ 13035489 (-) True G2236
TU2508 other downstream 1155343 12076038 ~ 12078152 (-) False AMCG00003625
TU2480 other downstream 1293712 11923808 ~ 11939783 (-) True AMCG00003623
TU2225 other downstream 2128823 11103326 ~ 11104672 (-) False AMCG00003595
TU2876 other upstream 772465 14009458 ~ 14013021 (-) True G2373
TU3027 other upstream 1573793 14810786 ~ 14811331 (-) True G2500
TU3242 other upstream 2278680 15515673 ~ 15591730 (-) True G2665
TU3879 other upstream 4705584 17942577 ~ 17944942 (-) True G3181
TU3909 other upstream 4909667 18146660 ~ 18152381 (-) True AMCG00003782

Expression Profile