RNA id: TU2819



Basic Information


Item Value
RNA id TU2819
length 226
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G2323
representative True

Chromosome Information


Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 13414931 ~ 13415156 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


cTCCCActggtaacgaactttgattacggactgtgactacgaacctgccttgcccctgtcgtgcttctgtttgcccggtgttcggctctaccgacccgggcatttactgttattgttagtgtttgttttgtagttagggattgttgacgtttagttagtgctcggacagagctaggttttgttttgctttttgacgctgtgcctgccattaagggaagcaataaaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2780 lncRNA upstream 160488 13247309 ~ 13254443 (+) True G2294
TU2760 lncRNA upstream 186574 13227235 ~ 13228357 (+) True G2281
TU2745 lncRNA upstream 312265 13102457 ~ 13102666 (+) True G2267
TU2742 lncRNA upstream 313615 13098561 ~ 13101316 (+) True G2264
TU2723 lncRNA upstream 334910 13074688 ~ 13080021 (+) True G2250
TU2822 lncRNA downstream 70436 13485592 ~ 13485807 (+) True G2326
TU2825 lncRNA downstream 92731 13507887 ~ 13509930 (+) True G2329
TU2826 lncRNA downstream 95082 13510238 ~ 13510674 (+) True G2330
TU2827 lncRNA downstream 96379 13511535 ~ 13511829 (+) True G2331
TU2828 lncRNA downstream 97038 13512194 ~ 13512531 (+) True G2332
AMCG00003656 mRNA upstream 89709 13320203 ~ 13325222 (+) True AMCG00003656
AMCG00003654 mRNA upstream 168076 13242051 ~ 13246855 (+) True AMCG00003654
AMCG00003655 mRNA upstream 208092 13156234 ~ 13206839 (+) True AMCG00003655
AMCG00003653 mRNA upstream 322837 13091093 ~ 13092094 (+) True AMCG00003653
AMCG00003647 mRNA upstream 359750 13053429 ~ 13055181 (+) True AMCG00003647
AMCG00003666 mRNA downstream 322446 13737602 ~ 13744368 (+) True AMCG00003666
AMCG00003668 mRNA downstream 382123 13797279 ~ 13797599 (+) True AMCG00003668
AMCG00003670 mRNA downstream 594315 14009471 ~ 14013046 (+) True AMCG00003670
AMCG00003669 mRNA downstream 641295 14056451 ~ 14067694 (+) True AMCG00003669
AMCG00003673 mRNA downstream 676857 14092013 ~ 14190098 (+) True AMCG00003673
TU2754 other upstream 258304 13155060 ~ 13156627 (+) False AMCG00003655
TU2685 other upstream 372334 13037437 ~ 13042597 (+) True AMCG00003648
TU2385 other upstream 1837602 11573731 ~ 11577329 (+) True G1989
TU2334 other upstream 1923488 11490185 ~ 11491443 (+) False AMCG00003606
TU1883 other upstream 3634029 9777508 ~ 9780902 (+) True AMCG00003570
TU2954 other downstream 1003360 14418516 ~ 14419732 (+) True G2440
TU3283 other downstream 2620507 16035663 ~ 16039640 (+) False AMCG00003712
TU3719 other downstream 4266661 17681817 ~ 17683988 (+) True G3047
TU3792 other downstream 4722599 18137755 ~ 18142633 (+) True AMCG00003779
TU3794 other downstream 4731504 18146660 ~ 18152314 (+) True G3108

Expression Profile