RNA id: TU3213


Basic Information

Item Value
RNA id TU3213
length 224
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G2637
representative True

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 15378758 ~ 15378981 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GGTAAATGCAAAAGACCTGCTTATCAACCACACCAGATCTGCCGCTCACTTTTCTTACCTTTTACTGTACTTCCATACTTCTGtggatttttttggttttctgagAACAATTTGCATGACTGGATCATATAACGCTCATTAATGTAAAGCATAATCCAGTTCAATGTCAAGTGCACCCCAGACAGACTCCAGTGCACGGGTCAAACTGGGATCTCAGATAACCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU3212 lncRNA downstream 203 15378197 ~ 15378555 (-) True G2636
TU3188 lncRNA downstream 60548 15315396 ~ 15318210 (-) True G2615
TU3120 lncRNA downstream 262575 15115983 ~ 15116183 (-) True G2565
TU3021 lncRNA downstream 679521 14698959 ~ 14699237 (-) True G2494
TU2961 lncRNA downstream 957443 14420731 ~ 14421315 (-) True G2447
TU3237 lncRNA upstream 130892 15509873 ~ 15510081 (-) True G2661
TU3261 lncRNA upstream 525506 15904487 ~ 15904821 (-) True G2682
TU3278 lncRNA upstream 650443 16029424 ~ 16030186 (-) True G2697
TU3281 lncRNA upstream 653706 16032687 ~ 16032922 (-) True G2699
TU3305 lncRNA upstream 700418 16079399 ~ 16084866 (-) True G2720
AMCG00003697 mRNA downstream 207426 15161825 ~ 15171332 (-) True AMCG00003697
AMCG00003699 mRNA downstream 219441 15157494 ~ 15159317 (-) True AMCG00003699
AMCG00003700 mRNA downstream 235063 15142235 ~ 15143695 (-) True AMCG00003700
AMCG00003698 mRNA downstream 244974 15121769 ~ 15133784 (-) True AMCG00003698
AMCG00003692 mRNA downstream 362080 15006417 ~ 15016678 (-) True AMCG00003692
AMCG00003704 mRNA upstream 2475 15381456 ~ 15388921 (-) True AMCG00003704
AMCG00003707 mRNA upstream 40711 15419692 ~ 15456251 (-) True AMCG00003707
AMCG00003708 mRNA upstream 99513 15478494 ~ 15487201 (-) True AMCG00003708
AMCG00003709 mRNA upstream 136691 15515672 ~ 15519593 (-) True AMCG00003709
AMCG00003710 mRNA upstream 211641 15590622 ~ 15591023 (-) True AMCG00003710
TU3027 other downstream 567427 14810786 ~ 14811331 (-) True G2500
TU2876 other downstream 1365737 14009458 ~ 14013021 (-) True G2373
TU2747 other downstream 2267630 13104356 ~ 13111128 (-) False AMCG00003652
TU2704 other downstream 2343269 13034953 ~ 13035489 (-) True G2236
TU2508 other downstream 3300606 12076038 ~ 12078152 (-) False AMCG00003625
TU3242 other upstream 136692 15515673 ~ 15591730 (-) True G2665
TU3879 other upstream 2563596 17942577 ~ 17944942 (-) True G3181
TU3909 other upstream 2767679 18146660 ~ 18152381 (-) True AMCG00003782
TU4265 other upstream 4045982 19424963 ~ 19425366 (-) True G3517
TU4274 other upstream 4065035 19444016 ~ 19444743 (-) True G3523

Expression Profile