RNA id: TU3261


Basic Information

Item Value
RNA id TU3261
length 335
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G2682
representative True

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 15904487 ~ 15904821 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

tccagttctattcctcccatagtgtaattatagtggacatttttgttacctgcatgtaataccttgcacttgtccacattgaatttcatctgccaggtgtcggcccacaactgaatattatctaagtccctttgaatagcctgtgctgccgagattgtatctgctgagccacctattttagtatcatctgcaaatttgacaagtttgctaactatcccagagtccagatcattaatatagatcagaaaaagcaaaggccctagtactgatccctgtggaactccactaacaacctcactccagttagaagcgactcctctaatcaacaccctctg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU3237 lncRNA downstream 394406 15509873 ~ 15510081 (-) True G2661
TU3213 lncRNA downstream 525506 15378758 ~ 15378981 (-) True G2637
TU3212 lncRNA downstream 525932 15378197 ~ 15378555 (-) True G2636
TU3188 lncRNA downstream 586277 15315396 ~ 15318210 (-) True G2615
TU3120 lncRNA downstream 788304 15115983 ~ 15116183 (-) True G2565
TU3278 lncRNA upstream 124603 16029424 ~ 16030186 (-) True G2697
TU3281 lncRNA upstream 127866 16032687 ~ 16032922 (-) True G2699
TU3305 lncRNA upstream 174578 16079399 ~ 16084866 (-) True G2720
TU3310 lncRNA upstream 180294 16085115 ~ 16085995 (-) True G2722
TU3373 lncRNA upstream 343114 16247935 ~ 16250483 (-) True G2765
AMCG00003710 mRNA downstream 313464 15590622 ~ 15591023 (-) True AMCG00003710
AMCG00003709 mRNA downstream 384894 15515672 ~ 15519593 (-) True AMCG00003709
AMCG00003708 mRNA downstream 417286 15478494 ~ 15487201 (-) True AMCG00003708
AMCG00003707 mRNA downstream 448236 15419692 ~ 15456251 (-) True AMCG00003707
AMCG00003704 mRNA downstream 515566 15381456 ~ 15388921 (-) True AMCG00003704
AMCG00003714 mRNA upstream 137907 16042728 ~ 16055653 (-) True AMCG00003714
AMCG00003717 mRNA upstream 190325 16095146 ~ 16116740 (-) True AMCG00003717
AMCG00003716 mRNA upstream 270950 16175771 ~ 16181167 (-) True AMCG00003716
AMCG00003722 mRNA upstream 307844 16212665 ~ 16222773 (-) True AMCG00003722
AMCG00003721 mRNA upstream 324836 16229657 ~ 16245607 (-) True AMCG00003721
TU3242 other downstream 312757 15515673 ~ 15591730 (-) True G2665
TU3027 other downstream 1093156 14810786 ~ 14811331 (-) True G2500
TU2876 other downstream 1891466 14009458 ~ 14013021 (-) True G2373
TU2747 other downstream 2793359 13104356 ~ 13111128 (-) False AMCG00003652
TU2704 other downstream 2868998 13034953 ~ 13035489 (-) True G2236
TU3879 other upstream 2037756 17942577 ~ 17944942 (-) True G3181
TU3909 other upstream 2241839 18146660 ~ 18152381 (-) True AMCG00003782
TU4265 other upstream 3520142 19424963 ~ 19425366 (-) True G3517
TU4274 other upstream 3539195 19444016 ~ 19444743 (-) True G3523
TU4276 other upstream 3539195 19444016 ~ 19506753 (-) False G3523

Expression Profile