RNA id: TU3281


Basic Information

Item Value
RNA id TU3281
length 236
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G2699
representative True

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 16032687 ~ 16032922 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

actcggcaggtaggttggcccaaacatcttggagaactaaccacagttcttctgtggatttaggcagcctcagttgcttctctctcttcatgtaatcccagacagactcgatgatgttgagatcagggctctgtgggggccaaaccatcacttccaggactccttgttcttctttacactgaagatagttcttaatgactgtcgctgtatgtttggggttgttgtcatgctgcaga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU3278 lncRNA downstream 2501 16029424 ~ 16030186 (-) True G2697
TU3261 lncRNA downstream 127866 15904487 ~ 15904821 (-) True G2682
TU3237 lncRNA downstream 522606 15509873 ~ 15510081 (-) True G2661
TU3213 lncRNA downstream 653706 15378758 ~ 15378981 (-) True G2637
TU3212 lncRNA downstream 654132 15378197 ~ 15378555 (-) True G2636
TU3305 lncRNA upstream 46477 16079399 ~ 16084866 (-) True G2720
TU3310 lncRNA upstream 52193 16085115 ~ 16085995 (-) True G2722
TU3373 lncRNA upstream 215013 16247935 ~ 16250483 (-) True G2765
TU3452 lncRNA upstream 553140 16586062 ~ 16586266 (-) True G2832
TU3456 lncRNA upstream 555147 16588069 ~ 16588293 (-) True G2834
AMCG00003710 mRNA downstream 441664 15590622 ~ 15591023 (-) True AMCG00003710
AMCG00003709 mRNA downstream 513094 15515672 ~ 15519593 (-) True AMCG00003709
AMCG00003708 mRNA downstream 545486 15478494 ~ 15487201 (-) True AMCG00003708
AMCG00003707 mRNA downstream 576436 15419692 ~ 15456251 (-) True AMCG00003707
AMCG00003704 mRNA downstream 643766 15381456 ~ 15388921 (-) True AMCG00003704
AMCG00003714 mRNA upstream 9806 16042728 ~ 16055653 (-) True AMCG00003714
AMCG00003717 mRNA upstream 62224 16095146 ~ 16116740 (-) True AMCG00003717
AMCG00003716 mRNA upstream 142849 16175771 ~ 16181167 (-) True AMCG00003716
AMCG00003722 mRNA upstream 179743 16212665 ~ 16222773 (-) True AMCG00003722
AMCG00003721 mRNA upstream 196735 16229657 ~ 16245607 (-) True AMCG00003721
TU3242 other downstream 440957 15515673 ~ 15591730 (-) True G2665
TU3027 other downstream 1221356 14810786 ~ 14811331 (-) True G2500
TU2876 other downstream 2019666 14009458 ~ 14013021 (-) True G2373
TU2747 other downstream 2921559 13104356 ~ 13111128 (-) False AMCG00003652
TU2704 other downstream 2997198 13034953 ~ 13035489 (-) True G2236
TU3879 other upstream 1909655 17942577 ~ 17944942 (-) True G3181
TU3909 other upstream 2113738 18146660 ~ 18152381 (-) True AMCG00003782
TU4265 other upstream 3392041 19424963 ~ 19425366 (-) True G3517
TU4274 other upstream 3411094 19444016 ~ 19444743 (-) True G3523
TU4276 other upstream 3411094 19444016 ~ 19506753 (-) False G3523

Expression Profile