Item | Value |
---|---|
RNA id | TU4936 |
length | 412 |
lncRNA type | inter_gene |
GC content | 0.52 |
exon number | 1 |
gene id | G4071 |
representative | True |
Item | Value |
---|---|
chromosome id | CM030121.1 |
NCBI id | CM030121.1 |
chromosome length | 57050121 |
location | 23362036 ~ 23362447 (+) |
genome version | AmiCal1_2021_bowfin_Genome |
species | bowfin (Amia calva) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU4909 | lncRNA | upstream | 17031 | 23266270 ~ 23345005 (+) | True | G4057 |
TU4928 | lncRNA | upstream | 23798 | 23332601 ~ 23338238 (+) | False | AMCG00003884 |
TU4929 | lncRNA | upstream | 23798 | 23332601 ~ 23338238 (+) | True | AMCG00003884 |
TU4923 | lncRNA | upstream | 39361 | 23315334 ~ 23322675 (+) | True | G4059 |
TU4910 | lncRNA | upstream | 42914 | 23315628 ~ 23319122 (+) | False | G4058 |
TU4956 | lncRNA | downstream | 3744 | 23366191 ~ 23369996 (+) | True | G4089 |
TU5003 | lncRNA | downstream | 159426 | 23521873 ~ 23531567 (+) | False | AMCG00003891 |
TU5055 | lncRNA | downstream | 404961 | 23767408 ~ 23767759 (+) | True | G4162 |
TU5056 | lncRNA | downstream | 411293 | 23773740 ~ 23774052 (+) | True | G4163 |
TU5057 | lncRNA | downstream | 412193 | 23774640 ~ 23774943 (+) | True | G4164 |
AMCG00003884 | mRNA | upstream | 23795 | 23335176 ~ 23338241 (+) | False | AMCG00003884 |
AMCG00003885 | mRNA | upstream | 48159 | 23237346 ~ 23313877 (+) | True | AMCG00003885 |
AMCG00003881 | mRNA | upstream | 224795 | 23135448 ~ 23137241 (+) | True | AMCG00003881 |
AMCG00003882 | mRNA | upstream | 280522 | 23073014 ~ 23081514 (+) | True | AMCG00003882 |
AMCG00003883 | mRNA | upstream | 296106 | 23061960 ~ 23065930 (+) | True | AMCG00003883 |
AMCG00003889 | mRNA | downstream | 11846 | 23374293 ~ 23389309 (+) | True | AMCG00003889 |
AMCG00003892 | mRNA | downstream | 47888 | 23410335 ~ 23423173 (+) | True | AMCG00003892 |
AMCG00003894 | mRNA | downstream | 83375 | 23445822 ~ 23447419 (+) | True | AMCG00003894 |
AMCG00003890 | mRNA | downstream | 97393 | 23459840 ~ 23520587 (+) | True | AMCG00003890 |
AMCG00003891 | mRNA | downstream | 159379 | 23521826 ~ 23533875 (+) | True | AMCG00003891 |
TU4606 | other | upstream | 1438249 | 21922636 ~ 21923787 (+) | True | G3799 |
TU4563 | other | upstream | 1601406 | 21745850 ~ 21760630 (+) | True | G3771 |
TU4541 | other | upstream | 1812503 | 21549201 ~ 21549533 (+) | True | G3751 |
TU4227 | other | upstream | 3992770 | 19368193 ~ 19369266 (+) | False | AMCG00003828 |
TU3794 | other | upstream | 5209722 | 18146660 ~ 18152314 (+) | True | G3108 |
TU5028 | other | downstream | 347791 | 23710238 ~ 23713134 (+) | False | AMCG00003898 |
TU5311 | other | downstream | 1320953 | 24683400 ~ 24683920 (+) | True | G4360 |
TU5497 | other | downstream | 2431605 | 25794052 ~ 25795791 (+) | False | AMCG00003930 |
TU5898 | other | downstream | 4699916 | 28062363 ~ 28103211 (+) | True | G4831 |
TU5899 | other | downstream | 4700227 | 28062674 ~ 28067786 (+) | False | G4831 |