RNA id: TU697



Basic Information


Item Value
RNA id TU697
length 205
lncRNA type intronic
GC content 0.41
exon number 2
gene id G578
representative True

Chromosome Information


Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 3524024 ~ 3525095 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


cccctccagaccactgcgctcctccagtgccagaagactaactctgcctcctctccactctccttcctccagagccgctccttctcatccctggcccctaagtggtggaacgaccttcccactgaagtcaaaacagcagagtctctgacctccttccgacgcttactcaagacgcatcttttcagacagtactCACTGAAAAAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU653 lncRNA downstream 95733 3424088 ~ 3428291 (-) True G541
TU609 lncRNA downstream 312147 3195905 ~ 3211877 (-) True G500
TU568 lncRNA downstream 412973 3086465 ~ 3111051 (-) True G464
TU557 lncRNA downstream 465820 3006968 ~ 3058204 (-) True G458
TU547 lncRNA downstream 518343 3005372 ~ 3005681 (-) True G453
TU698 lncRNA upstream 11674 3536769 ~ 3537887 (-) False AMCG00003444
TU706 lncRNA upstream 71826 3596921 ~ 3599589 (-) True G586
TU746 lncRNA upstream 337902 3862997 ~ 3865429 (-) True G624
TU764 lncRNA upstream 368829 3893924 ~ 3895512 (-) False AMCG00003459
TU799 lncRNA upstream 395901 3920996 ~ 3974710 (-) True G664
AMCG00003439 mRNA downstream 108739 3404970 ~ 3415285 (-) True AMCG00003439
AMCG00003440 mRNA downstream 123340 3398726 ~ 3400684 (-) True AMCG00003440
AMCG00003436 mRNA downstream 232797 3290037 ~ 3291227 (-) True AMCG00003436
AMCG00003437 mRNA downstream 273302 3239884 ~ 3250722 (-) True AMCG00003437
AMCG00003435 mRNA downstream 306938 3213811 ~ 3217086 (-) True AMCG00003435
AMCG00003444 mRNA upstream 11077 3536172 ~ 3538967 (-) True AMCG00003444
AMCG00003449 mRNA upstream 184018 3709113 ~ 3714240 (-) True AMCG00003449
AMCG00003451 mRNA upstream 328052 3853147 ~ 3855295 (-) True AMCG00003451
AMCG00003459 mRNA upstream 351137 3876232 ~ 3895524 (-) True AMCG00003459
AMCG00003461 mRNA upstream 566997 4092092 ~ 4120379 (-) True AMCG00003461
TU643 other downstream 93752 3394657 ~ 3430272 (-) True G531
TU462 other downstream 1085203 2437727 ~ 2438821 (-) False AMCG00003422
TU425 other downstream 1122129 2397642 ~ 2401895 (-) False AMCG00003423
TU920 other upstream 1125676 4650771 ~ 4661367 (-) False AMCG00003476
TU1027 other upstream 1820744 5345839 ~ 5356468 (-) True AMCG00003484
TU2164 other upstream 7426081 10951176 ~ 10956335 (-) False AMCG00003586
TU2225 other upstream 7578231 11103326 ~ 11104672 (-) False AMCG00003595
TU2480 other upstream 8398713 11923808 ~ 11939783 (-) True AMCG00003623

Expression Profile