Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU7148 |
| length | 232 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G5808 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 34381868 ~ 34382099 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| ko04974 | Protein digestion and absorption |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU7144 | lncRNA | upstream | 89367 | 34292271 ~ 34292501 (+) | True | G5804 |
| TU7123 | lncRNA | upstream | 291746 | 34081826 ~ 34090122 (+) | True | G5788 |
| TU7121 | lncRNA | upstream | 301083 | 34078351 ~ 34080785 (+) | True | G5787 |
| TU7098 | lncRNA | upstream | 488725 | 33892474 ~ 33893143 (+) | True | G5768 |
| TU7059 | lncRNA | upstream | 610020 | 33769589 ~ 33771848 (+) | True | G5750 |
| TU7220 | lncRNA | downstream | 512003 | 34894102 ~ 34895661 (+) | True | G5867 |
| TU7229 | lncRNA | downstream | 517537 | 34899636 ~ 35350027 (+) | True | G5875 |
| TU7270 | lncRNA | downstream | 919004 | 35301103 ~ 35306949 (+) | True | G5914 |
| TU7378 | lncRNA | downstream | 1073577 | 35455676 ~ 35455887 (+) | True | G6002 |
| TU7383 | lncRNA | downstream | 1083763 | 35465862 ~ 35466655 (+) | True | G6007 |
| AMCG00004122 | mRNA | upstream | 248256 | 34131126 ~ 34133612 (+) | True | AMCG00004122 |
| AMCG00004121 | mRNA | upstream | 251845 | 34119571 ~ 34130023 (+) | True | AMCG00004121 |
| AMCG00004115 | mRNA | upstream | 468983 | 33905291 ~ 33912885 (+) | True | AMCG00004115 |
| AMCG00004113 | mRNA | upstream | 614232 | 33767046 ~ 33767636 (+) | True | AMCG00004113 |
| AMCG00004110 | mRNA | upstream | 620411 | 33747909 ~ 33761457 (+) | True | AMCG00004110 |
| AMCG00004125 | mRNA | downstream | 249122 | 34631221 ~ 34638669 (+) | True | AMCG00004125 |
| AMCG00004124 | mRNA | downstream | 284293 | 34666392 ~ 34685790 (+) | True | AMCG00004124 |
| AMCG00004126 | mRNA | downstream | 313304 | 34695403 ~ 34724610 (+) | True | AMCG00004126 |
| AMCG00004127 | mRNA | downstream | 416290 | 34798389 ~ 34808422 (+) | True | AMCG00004127 |
| AMCG00004128 | mRNA | downstream | 438069 | 34820168 ~ 34834115 (+) | True | AMCG00004128 |
| TU6919 | other | upstream | 1250682 | 33130120 ~ 33131186 (+) | True | G5642 |
| TU6554 | other | upstream | 3487041 | 30887995 ~ 30894827 (+) | True | AMCG00004056 |
| TU6431 | other | upstream | 4110344 | 30271210 ~ 30271524 (+) | True | G5245 |
| TU5898 | other | upstream | 6278657 | 28062363 ~ 28103211 (+) | True | G4831 |
| TU7209 | other | downstream | 470764 | 34852863 ~ 34870320 (+) | True | AMCG00004138 |
| TU7437 | other | downstream | 1370434 | 35752533 ~ 35766180 (+) | True | AMCG00004158 |
| TU7524 | other | downstream | 1890093 | 36272192 ~ 36274930 (+) | False | AMCG00004167 |
| TU7741 | other | downstream | 2391902 | 36774001 ~ 36774523 (+) | True | G6314 |
| TU7756 | other | downstream | 2479448 | 36861547 ~ 36891746 (+) | True | G6328 |
