RNA id: TU7449


Basic Information

Item Value
RNA id TU7449
length 226
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G6068
representative True

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 35820258 ~ 35820483 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ccggcccgtctggcaccaacaaccatgccacgctcaaaattgcttaaatcacttaaatgctttctttcccattcagacattcagtttggagttcaggagattgtcttgaccaggaccacacccctaaatgcattgaagcaactgccatgtgattagttggttagataattgcattaatgagaaattgaacaggtgttcctaataatcctttaggtgagtgtatatg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU7415 lncRNA downstream 144138 35673946 ~ 35676120 (-) True G6037
TU7412 lncRNA downstream 147579 35672451 ~ 35672679 (-) True G6034
TU7408 lncRNA downstream 151720 35668037 ~ 35668538 (-) True G6030
TU7385 lncRNA downstream 344917 35472868 ~ 35475341 (-) True G6009
TU7335 lncRNA downstream 471991 35345118 ~ 35348267 (-) False AMCG00004143
TU7459 lncRNA upstream 158956 35979439 ~ 35979839 (-) True G6077
TU7488 lncRNA upstream 341164 36161647 ~ 36163434 (-) True G6103
TU7516 lncRNA upstream 436506 36256989 ~ 36257189 (-) True G6129
TU7523 lncRNA upstream 448631 36269114 ~ 36270818 (-) True G6136
TU7593 lncRNA upstream 565879 36386362 ~ 36390506 (-) True G6197
AMCG00004155 mRNA downstream 100071 35696622 ~ 35720187 (-) True AMCG00004155
AMCG00004156 mRNA downstream 128325 35685255 ~ 35691933 (-) True AMCG00004156
AMCG00004154 mRNA downstream 177153 35642527 ~ 35643105 (-) True AMCG00004154
AMCG00004153 mRNA downstream 288988 35520023 ~ 35531270 (-) True AMCG00004153
AMCG00004152 mRNA downstream 324339 35476558 ~ 35495919 (-) True AMCG00004152
AMCG00004162 mRNA upstream 346818 36167301 ~ 36172699 (-) True AMCG00004162
AMCG00004169 mRNA upstream 457475 36277958 ~ 36285408 (-) True AMCG00004169
AMCG00004168 mRNA upstream 467912 36288395 ~ 36300239 (-) True AMCG00004168
AMCG00004172 mRNA upstream 492438 36312921 ~ 36339478 (-) True AMCG00004172
AMCG00004171 mRNA upstream 519691 36340174 ~ 36344689 (-) True AMCG00004171
TU7345 other downstream 405812 35354621 ~ 35414446 (-) False AMCG00004143
TU7292 other downstream 856419 34960960 ~ 34963839 (-) False AMCG00004132
TU7224 other downstream 927645 34891901 ~ 34892613 (-) True G5871
TU7138 other downstream 1684658 34132098 ~ 34135600 (-) True G5801
TU6815 other downstream 3223851 32593627 ~ 32596407 (-) True G5566
TU7893 other upstream 1547502 37367985 ~ 37368822 (-) True G6441
TU8320 other upstream 4021452 39841935 ~ 39849123 (-) True G6792
TU8946 other upstream 6556243 42376726 ~ 42379406 (-) True AMCG00004313
TU9361 other upstream 8700431 44520914 ~ 44522213 (-) True G7608
TU9683 other upstream 10486443 46306926 ~ 46307319 (-) True G7868

Expression Profile