RNA id: TU7683


Basic Information

Item Value
RNA id TU7683
length 237
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G6274
representative True

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 36702213 ~ 36702449 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CACCGTGAGAGTGGATCAGTCCTTCAGAGAGCCATGGCATGGGGTGGCATACTCACTCTGGTAGGACTGTTGGATGGGCCTCGTTTACATTTCCCAGGTTGCCATCAAAAGGCATTGGTTCTGCCATGGGCCGAGGGTGGAAGTGTTGTGACCCTGCCAGCTCCATCTTTGACATCCCTGCAAAGACACAGACAGTGCTTTAGAGTCTATCCctttctctttaaaaatgacTGCATA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU7682 lncRNA upstream 762 36701087 ~ 36701451 (+) True G6273
TU7681 lncRNA upstream 2068 36698915 ~ 36700145 (+) True G6272
TU7680 lncRNA upstream 3915 36698096 ~ 36698298 (+) True G6271
TU7673 lncRNA upstream 4328 36689382 ~ 36697885 (+) True AMCG00004179
TU7677 lncRNA upstream 10970 36689382 ~ 36691243 (+) False AMCG00004179
TU7684 lncRNA downstream 256 36702705 ~ 36702968 (+) True G6275
TU7685 lncRNA downstream 2059 36704508 ~ 36704759 (+) True G6276
TU7686 lncRNA downstream 3221 36705670 ~ 36707435 (+) True G6277
TU7737 lncRNA downstream 65288 36767737 ~ 36768023 (+) True G6310
TU7742 lncRNA downstream 72536 36774985 ~ 36776982 (+) True G6315
AMCG00004179 mRNA upstream 11929 36689380 ~ 36690284 (+) False AMCG00004179
AMCG00004176 mRNA upstream 32565 36663802 ~ 36669648 (+) True AMCG00004176
AMCG00004174 mRNA upstream 200097 36501826 ~ 36502116 (+) True AMCG00004174
AMCG00004173 mRNA upstream 233189 36454991 ~ 36469024 (+) True AMCG00004173
AMCG00004170 mRNA upstream 311701 36348573 ~ 36390512 (+) True AMCG00004170
AMCG00004180 mRNA downstream 40178 36742627 ~ 36746065 (+) True AMCG00004180
AMCG00004186 mRNA downstream 46407 36748856 ~ 36765206 (+) True AMCG00004186
AMCG00004187 mRNA downstream 87985 36790434 ~ 36873869 (+) True AMCG00004187
AMCG00004192 mRNA downstream 181909 36884358 ~ 36904094 (+) True AMCG00004192
AMCG00004191 mRNA downstream 210197 36912646 ~ 36918990 (+) True AMCG00004191
TU7524 other upstream 427283 36272192 ~ 36274930 (+) False AMCG00004167
TU7437 other upstream 936033 35752533 ~ 35766180 (+) True AMCG00004158
TU7209 other upstream 1831893 34852863 ~ 34870320 (+) True AMCG00004138
TU6919 other upstream 3571027 33130120 ~ 33131186 (+) True G5642
TU6554 other upstream 5807386 30887995 ~ 30894827 (+) True AMCG00004056
TU7741 other downstream 71552 36774001 ~ 36774523 (+) True G6314
TU7756 other downstream 159098 36861547 ~ 36891746 (+) True G6328
TU7800 other downstream 296908 36999357 ~ 37000158 (+) True G6369
TU8679 other downstream 4757127 41459576 ~ 41507231 (+) True G7094
TU8899 other downstream 5510061 42212510 ~ 42216362 (+) False AMCG00004304

Expression Profile