RNA id: TU7748


Basic Information

Item Value
RNA id TU7748
length 219
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G6321
representative True

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 36782012 ~ 36782230 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CCTGTGTGCTCAATTGCTGGATTCAATCCACATTGTACAAAAACAAGAATGGGATCATTTTTCATAGTATTATGCTCAGACACCACAAGAGGGCAACACACTCTTATACAAAATGCACCAGCCTAGGAGATGAGCCGAGTATCAGCCGTCTATTCAGGAGATAACTTTgaagtaattatatattttcttctatgTGTTGGTAGATTTgcgtatatattt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU7747 lncRNA upstream 595 36780561 ~ 36781417 (+) True G6320
TU7746 lncRNA upstream 2862 36778880 ~ 36779150 (+) True G6319
TU7745 lncRNA upstream 3435 36778368 ~ 36778577 (+) True G6318
TU7744 lncRNA upstream 3847 36777934 ~ 36778165 (+) True G6317
TU7743 lncRNA upstream 4489 36777129 ~ 36777523 (+) True G6316
TU7820 lncRNA downstream 245809 37028039 ~ 37028246 (+) True G6383
TU7844 lncRNA downstream 375946 37158176 ~ 37265504 (+) True G6405
TU7861 lncRNA downstream 533415 37315645 ~ 37318146 (+) True G6421
TU7870 lncRNA downstream 555296 37337526 ~ 37341014 (+) True G6427
TU7873 lncRNA downstream 561831 37344061 ~ 37344445 (+) True G6428
AMCG00004186 mRNA upstream 16806 36748856 ~ 36765206 (+) True AMCG00004186
AMCG00004180 mRNA upstream 35947 36742627 ~ 36746065 (+) True AMCG00004180
AMCG00004179 mRNA upstream 91728 36689380 ~ 36690284 (+) False AMCG00004179
AMCG00004176 mRNA upstream 112364 36663802 ~ 36669648 (+) True AMCG00004176
AMCG00004174 mRNA upstream 279896 36501826 ~ 36502116 (+) True AMCG00004174
AMCG00004187 mRNA downstream 8204 36790434 ~ 36873869 (+) True AMCG00004187
AMCG00004192 mRNA downstream 102128 36884358 ~ 36904094 (+) True AMCG00004192
AMCG00004191 mRNA downstream 130416 36912646 ~ 36918990 (+) True AMCG00004191
AMCG00004190 mRNA downstream 154674 36936904 ~ 36939547 (+) True AMCG00004190
AMCG00004193 mRNA downstream 416693 37198923 ~ 37231208 (+) True AMCG00004193
TU7741 other upstream 7489 36774001 ~ 36774523 (+) True G6314
TU7524 other upstream 507082 36272192 ~ 36274930 (+) False AMCG00004167
TU7437 other upstream 1015832 35752533 ~ 35766180 (+) True AMCG00004158
TU7209 other upstream 1911692 34852863 ~ 34870320 (+) True AMCG00004138
TU6919 other upstream 3650826 33130120 ~ 33131186 (+) True G5642
TU7756 other downstream 79317 36861547 ~ 36891746 (+) True G6328
TU7800 other downstream 217127 36999357 ~ 37000158 (+) True G6369
TU8679 other downstream 4677346 41459576 ~ 41507231 (+) True G7094
TU8899 other downstream 5430280 42212510 ~ 42216362 (+) False AMCG00004304
TU9000 other downstream 5906549 42688779 ~ 42691109 (+) True G7329

Expression Profile