RNA id: TU7820



Basic Information


Item Value
RNA id TU7820
length 208
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G6383
representative True

Chromosome Information


Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 37028039 ~ 37028246 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gccaaacaagtccgatccatggaggccccacctcgcaacttacaggacttaaaggatctgctgctaacgtcttggtgccagataccacagcacaccttcagaggtctagtggagtccatgcctcgacgggtcagggctgttttggcagcaaaagggggacctacacaatattaggcaggtggtcataatgttatggctgatcggtgta

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU7748 lncRNA upstream 245809 36782012 ~ 36782230 (+) True G6321
TU7747 lncRNA upstream 246622 36780561 ~ 36781417 (+) True G6320
TU7746 lncRNA upstream 248889 36778880 ~ 36779150 (+) True G6319
TU7745 lncRNA upstream 249462 36778368 ~ 36778577 (+) True G6318
TU7744 lncRNA upstream 249874 36777934 ~ 36778165 (+) True G6317
TU7844 lncRNA downstream 129930 37158176 ~ 37265504 (+) True G6405
TU7861 lncRNA downstream 287399 37315645 ~ 37318146 (+) True G6421
TU7870 lncRNA downstream 309280 37337526 ~ 37341014 (+) True G6427
TU7873 lncRNA downstream 315815 37344061 ~ 37344445 (+) True G6428
TU7929 lncRNA downstream 486636 37514882 ~ 37516498 (+) True G6471
AMCG00004190 mRNA upstream 88492 36936904 ~ 36939547 (+) True AMCG00004190
AMCG00004191 mRNA upstream 109049 36912646 ~ 36918990 (+) True AMCG00004191
AMCG00004192 mRNA upstream 123945 36884358 ~ 36904094 (+) True AMCG00004192
AMCG00004187 mRNA upstream 154170 36790434 ~ 36873869 (+) True AMCG00004187
AMCG00004186 mRNA upstream 262833 36748856 ~ 36765206 (+) True AMCG00004186
AMCG00004193 mRNA downstream 170677 37198923 ~ 37231208 (+) True AMCG00004193
AMCG00004197 mRNA downstream 365856 37394102 ~ 37417947 (+) True AMCG00004197
AMCG00004199 mRNA downstream 399203 37427449 ~ 37445287 (+) True AMCG00004199
AMCG00004206 mRNA downstream 448043 37476289 ~ 37478687 (+) True AMCG00004206
AMCG00004205 mRNA downstream 450584 37478830 ~ 37485632 (+) True AMCG00004205
TU7800 other upstream 27881 36999357 ~ 37000158 (+) True G6369
TU7756 other upstream 136293 36861547 ~ 36891746 (+) True G6328
TU7741 other upstream 253516 36774001 ~ 36774523 (+) True G6314
TU7524 other upstream 753109 36272192 ~ 36274930 (+) False AMCG00004167
TU7437 other upstream 1261859 35752533 ~ 35766180 (+) True AMCG00004158
TU8679 other downstream 4431330 41459576 ~ 41507231 (+) True G7094
TU8899 other downstream 5184264 42212510 ~ 42216362 (+) False AMCG00004304
TU9000 other downstream 5660533 42688779 ~ 42691109 (+) True G7329
TU9559 other downstream 8933764 45962010 ~ 45968306 (+) True AMCG00004380
TU9841 other downstream 11118642 48146888 ~ 48147156 (+) True G7999

Expression Profile