RNA id: TU8059


Basic Information

Item Value
RNA id TU8059
length 255
lncRNA type inter_gene
GC content 0.53
exon number 1
gene id G6573
representative True

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 38255229 ~ 38255483 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATAGCTTGACTTGCCACTGGAGGCCAGGCCTGGAGAAGTAGTATTAAGTGCTGCATCTCCTCCCATTTGCTGCTAGAGCTCAACAACTCCACAAATAGCTGGTATCGCTTCTCCTCATTCTCAATGTCACCAATTTCCAGCTGGGGGGAAAGAAGAACATGTTCCAGTTTACAACAATTTTAGAACAAATCtgcatttcaatgcatttctcACAAACTAACAGCATTTAATTGGGTTAATGAAACTGAGGTTTAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU7999 lncRNA upstream 407509 37844509 ~ 37847720 (+) True AMCG00004210
TU7929 lncRNA upstream 738731 37514882 ~ 37516498 (+) True G6471
TU7873 lncRNA upstream 910784 37344061 ~ 37344445 (+) True G6428
TU7870 lncRNA upstream 914215 37337526 ~ 37341014 (+) True G6427
TU7861 lncRNA upstream 937083 37315645 ~ 37318146 (+) True G6421
TU8071 lncRNA downstream 161115 38416598 ~ 38418776 (+) True G6585
TU8073 lncRNA downstream 210913 38466396 ~ 38466643 (+) True G6586
TU8085 lncRNA downstream 360761 38616244 ~ 38616464 (+) True G6598
TU8105 lncRNA downstream 494431 38749914 ~ 38756252 (+) True G6617
TU8115 lncRNA downstream 520470 38775953 ~ 38777500 (+) True G6627
AMCG00004214 mRNA upstream 28418 38225556 ~ 38226811 (+) True AMCG00004214
AMCG00004216 mRNA upstream 35134 38213382 ~ 38220095 (+) True AMCG00004216
AMCG00004215 mRNA upstream 69092 38088863 ~ 38186137 (+) True AMCG00004215
AMCG00004210 mRNA upstream 408458 37832623 ~ 37846771 (+) False AMCG00004210
AMCG00004208 mRNA upstream 648007 37570803 ~ 37607222 (+) True AMCG00004208
AMCG00004218 mRNA downstream 476025 38731508 ~ 38743566 (+) True AMCG00004218
AMCG00004222 mRNA downstream 570338 38825821 ~ 38833968 (+) True AMCG00004222
AMCG00004223 mRNA downstream 584533 38840016 ~ 38850011 (+) True AMCG00004223
AMCG00004224 mRNA downstream 595306 38850789 ~ 38855317 (+) True AMCG00004224
AMCG00004225 mRNA downstream 698654 38954137 ~ 38963635 (+) True AMCG00004225
TU7800 other upstream 1255071 36999357 ~ 37000158 (+) True G6369
TU7756 other upstream 1363483 36861547 ~ 36891746 (+) True G6328
TU7741 other upstream 1480706 36774001 ~ 36774523 (+) True G6314
TU7524 other upstream 1980299 36272192 ~ 36274930 (+) False AMCG00004167
TU7437 other upstream 2489049 35752533 ~ 35766180 (+) True AMCG00004158
TU8679 other downstream 3204093 41459576 ~ 41507231 (+) True G7094
TU8899 other downstream 3957027 42212510 ~ 42216362 (+) False AMCG00004304
TU9000 other downstream 4433296 42688779 ~ 42691109 (+) True G7329
TU9559 other downstream 7706527 45962010 ~ 45968306 (+) True AMCG00004380
TU9841 other downstream 9891405 48146888 ~ 48147156 (+) True G7999

Expression Profile