RNA id: TU8691


Basic Information

Item Value
RNA id TU8691
length 347
lncRNA type inter_gene
GC content 0.45
exon number 3
gene id G7104
representative False

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 41294176 ~ 41364065 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GCTTGAATgagtcggcccattctcctctgacctctagcatcaacaaggcattttcgcccacaggactgccgcatactggatgtttttcccttttcacaccattctttgtaaaccctagaaatggttgtgcgtgaaaatcccagtaactgagcagattgtgaaatactcagcccggcccgtctggcaccaacaaccaggagattgtcttgaccaggaccacacccctaaatgcattgaagcaactgccatgtgattggttggttagataattgcattaatgagaaattgaacaggtgttcctaataatcctttaggtgagtgtatgtgtCTGTGTTTCAGCTGTGATT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU8607 lncRNA downstream 384227 40916449 ~ 40921474 (-) True G7035
TU8593 lncRNA downstream 422534 40881808 ~ 40883167 (-) True G7023
TU8539 lncRNA downstream 609386 40675171 ~ 40696315 (-) True G6974
TU8499 lncRNA downstream 702886 40598954 ~ 40602815 (-) True G6939
TU8425 lncRNA downstream 1178909 40126548 ~ 40126792 (-) True G6872
TU8704 lncRNA upstream 20655 41384720 ~ 41386556 (-) True G7115
TU8708 lncRNA upstream 95744 41459809 ~ 41460321 (-) True G7117
TU8724 lncRNA upstream 210184 41574249 ~ 41574460 (-) True G7130
TU8725 lncRNA upstream 218396 41582461 ~ 41582767 (-) True G7131
TU8729 lncRNA upstream 223134 41587199 ~ 41587456 (-) True G7135
AMCG00004283 mRNA downstream 57227 41238427 ~ 41248474 (-) True AMCG00004283
AMCG00004284 mRNA downstream 80516 41210391 ~ 41225185 (-) True AMCG00004284
AMCG00004282 mRNA downstream 311109 40985740 ~ 40994592 (-) True AMCG00004282
AMCG00004281 mRNA downstream 339364 40953870 ~ 40966337 (-) True AMCG00004281
AMCG00004279 mRNA downstream 355184 40942095 ~ 40950517 (-) True AMCG00004279
AMCG00004285 mRNA upstream 2736 41366801 ~ 41374949 (-) True AMCG00004285
AMCG00004287 mRNA upstream 23724 41387789 ~ 41426392 (-) True AMCG00004287
AMCG00004288 mRNA upstream 74835 41438900 ~ 41442184 (-) True AMCG00004288
AMCG00004290 mRNA upstream 105299 41469364 ~ 41473040 (-) True AMCG00004290
AMCG00004302 mRNA upstream 700924 42064989 ~ 42067170 (-) False AMCG00004302
TU8320 other downstream 1456578 39841935 ~ 39849123 (-) True G6792
TU7893 other downstream 3936879 37367985 ~ 37368822 (-) True G6441
TU7345 other downstream 5891255 35354621 ~ 35414446 (-) False AMCG00004143
TU7292 other downstream 6341862 34960960 ~ 34963839 (-) False AMCG00004132
TU7224 other downstream 6413088 34891901 ~ 34892613 (-) True G5871
TU8946 other upstream 1012661 42376726 ~ 42379406 (-) True AMCG00004313
TU9361 other upstream 3156849 44520914 ~ 44522213 (-) True G7608
TU9683 other upstream 4942861 46306926 ~ 46307319 (-) True G7868
TU9698 other upstream 5104060 46468125 ~ 46468434 (-) True G7882
TU9761 other upstream 5520570 46884635 ~ 46887337 (-) False AMCG00004398

Expression Profile