RNA id: TU8725



Basic Information


Item Value
RNA id TU8725
length 307
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G7131
representative True

Chromosome Information


Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 41582461 ~ 41582767 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCGTAGCAAGCTCGTACTCTCGAACGGGCACTGAGCCCCACACCCTGCtttgttcagtttttcctttttagacCTGAAAGGAGAAgacacaagaaacaaacaaagaaaagtcaaacacacacacacacacacacagactaaccTGCCTGTCGACCTCAGGAAGAAGGCCTAGCAGTCGCTGTTGGCACTCCGGGGGCAGAACGGAGAACGTGTGCTTGTTTATTAGGGCCCGGAGGTTGGTGTTGACCAAGATGGATTCTGGAGTTTCCACGTCGATTTCTGCACACTTTGTACGTTTCAGCTGCCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU8724 lncRNA downstream 8001 41574249 ~ 41574460 (-) True G7130
TU8708 lncRNA downstream 122140 41459809 ~ 41460321 (-) True G7117
TU8704 lncRNA downstream 195905 41384720 ~ 41386556 (-) True G7115
TU8690 lncRNA downstream 218396 41294176 ~ 41364065 (-) False G7104
TU8729 lncRNA upstream 4432 41587199 ~ 41587456 (-) True G7135
TU8731 lncRNA upstream 13892 41596659 ~ 41597449 (-) True G7137
TU8732 lncRNA upstream 18658 41601425 ~ 41602601 (-) True G7138
TU8752 lncRNA upstream 41165 41623932 ~ 41642726 (-) True G7148
TU8816 lncRNA upstream 402476 41985243 ~ 42024740 (-) True G7192
AMCG00004290 mRNA downstream 109421 41469364 ~ 41473040 (-) True AMCG00004290
AMCG00004288 mRNA downstream 140277 41438900 ~ 41442184 (-) True AMCG00004288
AMCG00004287 mRNA downstream 156069 41387789 ~ 41426392 (-) True AMCG00004287
AMCG00004285 mRNA downstream 207512 41366801 ~ 41374949 (-) True AMCG00004285
AMCG00004283 mRNA downstream 333987 41238427 ~ 41248474 (-) True AMCG00004283
AMCG00004302 mRNA upstream 482222 42064989 ~ 42067170 (-) False AMCG00004302
AMCG00004306 mRNA upstream 518922 42101689 ~ 42108599 (-) True AMCG00004306
AMCG00004307 mRNA upstream 535886 42118653 ~ 42150175 (-) True AMCG00004307
AMCG00004310 mRNA upstream 750457 42333224 ~ 42336612 (-) True AMCG00004310
AMCG00004311 mRNA upstream 772784 42355551 ~ 42361988 (-) True AMCG00004311
TU8320 other downstream 1733338 39841935 ~ 39849123 (-) True G6792
TU7893 other downstream 4213639 37367985 ~ 37368822 (-) True G6441
TU7345 other downstream 6168015 35354621 ~ 35414446 (-) False AMCG00004143
TU7292 other downstream 6618622 34960960 ~ 34963839 (-) False AMCG00004132
TU7224 other downstream 6689848 34891901 ~ 34892613 (-) True G5871
TU8946 other upstream 793959 42376726 ~ 42379406 (-) True AMCG00004313
TU9361 other upstream 2938147 44520914 ~ 44522213 (-) True G7608
TU9683 other upstream 4724159 46306926 ~ 46307319 (-) True G7868
TU9698 other upstream 4885358 46468125 ~ 46468434 (-) True G7882
TU9761 other upstream 5301868 46884635 ~ 46887337 (-) False AMCG00004398

Expression Profile